DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gel and vill

DIOPT Version :9

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_001005657.1 Gene:vill / 448145 XenbaseID:XB-GENE-945607 Length:876 Species:Xenopus tropicalis


Alignment Length:792 Identity:275/792 - (34%)
Similarity:395/792 - (49%) Gaps:105/792 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 MHPSFANAGRTPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKK-LSWDVHFWLG 122
            |..:..|..|.|||:||.:|..:.|..|:..||.|:.||.:|:|   .||:... |..|:|:|:|
 Frog     1 MTQNLENMCRKPGLQIWSMEKMKLVPIPEKAYGSFFEGDCYILL---YNKQTPNGLISDIHYWIG 62

  Fly   123 LETSTDEAGAAAILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHVETN 187
            .::|.||.|:||....|:|.||.|||:||||||.|||..|.||||||:.|::|||.:||||||||
 Frog    63 KDSSQDEQGSAAFYATQIDGLLGGGPIQHREVQGHESATFKSYFKNGVIYKKGGVSSGFKHVETN 127

  Fly   188 AQGETRLFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAANQI 252
            .....||..||||::|...:|.:|.:|.|.||.|:||.|..|..:.|.::.:.|:::|.|.|..|
 Frog   128 MYNIRRLLHVKGKKHVTATEVAMSWNSFNKGDVFLLDLGKVIIQWNGPESNKSERIRACSLAQSI 192

  Fly   253 RDQDHNGRARVQIVDDFSTDAD-KQHFFDVLGSGSA---DQVPDESTADEDSAFERTDAAAVSLY 313
            ||.:..|||::.::|:.....| .|....|||:.:.   |.||||. |||.      ..|.|.||
 Frog   193 RDDERGGRAQIGVIDNEQDSPDLMQIMVAVLGARTGELKDSVPDEK-ADEQ------QKANVRLY 250

  Fly   314 KVSDASGKLKVDIIGQKPLTQAMLDTRECFILDTGS-GIFVWVGKGATQKEKTDAMAKAQEFLRT 377
            .|.:....|.|..:..|||||.:|...:|.|||.|. .|:||.||.::.:||:.|.::|..|::.
 Frog   251 HVFEKDANLVVQELATKPLTQDLLQHEDCHILDQGGVKIYVWRGKNSSPEEKSAAFSRAVGFIQA 315

  Fly   378 KKYPAWTQIHRIVEGSESAPFKQYFDTWRDAGMSHSRLIRSALGIGSDELLNDDEIDSVVTQLKK 442
            |.||..|.:..:.:|:|||.|||.|..|:|.|.:..  :.....:|....:...:.|        
 Frog   316 KGYPPTTNVEVVNDGAESAMFKQLFQNWKDVGETQG--LGKTFSVGKIAKVEQTKFD-------- 370

  Fly   443 SGGRAFGFMPDHGQNVIETITQYVAKP-----------GSDEIVVSTVPFDEKLPL--------- 487
                               :.|..|:|           .|..:.|..:   |||.|         
 Frog   371 -------------------VNQLYARPELAAEQRMVDDASGNVEVWRI---EKLELAEVEPRTYG 413

  Fly   488 --LGFASYVLTYNYEANNGDTGSLTYVWHGVKASA-AARKRAFEEGLVGSK---DGLLVQTNQGH 546
              .|...|::.|.| ..:|....|.|:|.|..||. .....||:...:..|   ..:.::...|.
 Frog   414 QFYGGDCYLILYTY-MKSGRPNYLLYMWLGRHASQDEITACAFQAVQLDKKYHDQPVQIRVTMGK 477

  Fly   547 EPRHFYKIFKGKLL-----TSFTAL-----PVTAQLFRIRGTVESDVHASEVAADSSSLASSDAF 601
            ||||...:||||::     ||...:     |:  :||:::||.|.:..|:||.|.:|||.|:|.|
 Frog   478 EPRHLQAMFKGKMIIYEGGTSRLGVHEPEAPI--KLFQVKGTNEYNTKATEVPARASSLNSNDVF 540

  Fly   602 VLHSGKSHKIYIWNGLGASAFEKQAAVDRFSDYWDDVELEQVEEGAEPDEFWEELNGEGQY--DR 664
            ||.:  ....|:|.|.|.|..|::.| ...::.....:.:.:.||.||.|||..|.|:..|  |:
 Frog   541 VLKT--ESMCYLWCGKGCSGDEREMA-KTVANIISKQDKQTILEGQEPAEFWVALGGKAPYASDK 602

  Fly   665 SLGDDGAPLLESRLFHCHLSSGGFLKVEEVAQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEEN 729
            .. .:.|.....|||.|...:|.|: :.||..:.|.|||.||:||||..:||:||||...::.|.
 Frog   603 RF-QEQAVQYSPRLFECSNQTGRFV-MTEVVDFCQSDLDEDDVMLLDTWEEIFLWVGKSANDYEK 665

  Fly   730 GKLLDTAKLYFNLEPTARSFDTVSIIRVPQGKEPRVFKRMFPNWDDNYWQNQPSYEDMK------ 788
            .:.:..::.|....|..|...| .||.|.||.||..|...|..||.:.|.:..||||||      
 Frog   666 TESVKASQEYLRAHPAGRDLAT-PIILVKQGHEPPTFTGWFNAWDSHKWSSDLSYEDMKKTLGDV 729

  Fly   789 ----QLVIDANN 796
                |:.:|..|
 Frog   730 SAISQISVDLQN 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 54/113 (48%)
gelsolin_S2_like 191..283 CDD:200445 33/92 (36%)
gelsolin_S3_like 307..404 CDD:200448 40/97 (41%)
ADF_gelsolin 470..558 CDD:301701 27/102 (26%)
ADF_gelsolin 569..661 CDD:301701 33/91 (36%)
gelsolin_S6_like 675..774 CDD:200447 38/98 (39%)
villNP_001005657.1 gelsolin_S1_like 5..116 CDD:200446 54/113 (48%)
gelsolin_S2_like 133..224 CDD:200445 33/90 (37%)
gelsolin_S3_like 244..342 CDD:200448 40/97 (41%)
gelsolin_S4_like 386..486 CDD:200449 25/103 (24%)
gelsolin_S5_like 507..597 CDD:200444 34/94 (36%)
gelsolin_S6_like 613..709 CDD:200447 38/97 (39%)
VHP 842..876 CDD:280388
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I9367
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 455 1.000 Inparanoid score I1540
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 1 1.000 - - FOG0000527
OrthoInspector 1 1.000 - - otm48862
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X232
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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