DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gel and vil1

DIOPT Version :9

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_956532.1 Gene:vil1 / 393207 ZFINID:ZDB-GENE-040426-799 Length:834 Species:Danio rerio


Alignment Length:760 Identity:278/760 - (36%)
Similarity:408/760 - (53%) Gaps:65/760 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHFWLGLETSTDEAGAA 133
            ||||:|||:||.|.|..|...:|:|:.|||:::|.|  :|.....|:|:|:|||..||.||.|||
Zfish    17 TPGLQIWRVENMELVPCPSKTFGQFFEGDSYVILYT--HKTSNNFSYDIHYWLGKSTSQDEMGAA 79

  Fly   134 AILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHVETNAQGETRLFQVK 198
            ||.|.|:||.|.|..|||||.|.|||..|..|||.||.|::|||.:|.|.||||.....||..||
Zfish    80 AIYTTQMDDHLGGVAVQHRETQGHESATFQGYFKQGIIYKKGGVASGMKQVETNTYNIRRLLHVK 144

  Fly   199 GKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAANQIRDQDHNGRARV 263
            |.::|...:|.:|.:|.|.||.|:||.||.|..:.|.::.|:|:|:.::.|..|||::..|||:|
Zfish   145 GNKHVVAGEVEMSWNSFNKGDVFLLDLGSLIIQWNGPKSNRMERLRGMNLAKDIRDRERGGRAQV 209

  Fly   264 QIV---DDFSTDADKQHFFDVLG---SGSADQVPDESTADEDSAFERTDAAAVSLYKVSDASGKL 322
            .:|   |:.|::...:.....||   ....:.:||| ..||..      ..|:.||.:|||.|.|
Zfish   210 AVVEGDDEQSSEEAMKLMKQSLGERPKNIKEAIPDE-IVDEKL------KTAIKLYHISDAQGSL 267

  Fly   323 KVDIIGQKPLTQAMLDTRECFILDTGS-GIFVWVGKGATQKEKTDAMAKAQEFLRTKKYPAWTQI 386
            .|..:..|||||.:|.|.:|::||.|. .||:|.||.|::.|:|:::..|:.:::.|.||..|.|
Zfish   268 VVQEVAVKPLTQDLLKTEDCYLLDQGGIKIFIWKGKKASKAERTESLKMAEAYVKAKGYPVSTYI 332

  Fly   387 HRIVEGSESAPFKQYFDTWRDAGMSHSRLIRSALGIGSDELLNDDEIDSVVTQLKKSGGRAFGFM 451
            ..:.||:||:.|||.|..|.|.|.:        :|:|:..  |..:| :.|.|:|      |...
Zfish   333 ETVSEGAESSVFKQLFQKWTDKGQT--------VGMGTTH--NPGKI-AKVEQVK------FDAT 380

  Fly   452 PDHGQNVIETITQYVAKPGSDEIVVSTVPFDEKLPL--------LGFASYVLTYNYEANNGDTGS 508
            ..|.:..| ...|.:...||.|..|..:..:|..|:        .|...|::.|.||.:: ....
Zfish   381 SMHARPDI-AAQQKMVDDGSGEAEVWRIEDNELAPVDRKWLGHFYGGDCYLILYKYEVSS-KFHY 443

  Fly   509 LTYVWHGVKASAAARKR-AFEEGLVGSK---DGLLVQTNQGHEPRHFYKIFKGKLLT-------- 561
            :.|:|.|..||.|.... |::..::..|   :.:.|:...|.||.|...|||||::.        
Zfish   444 ILYMWQGRHASTAELTACAYQAVILDQKYNGEPVQVRVPMGKEPMHLMAIFKGKMIVYEEGSSRE 508

  Fly   562 -SFTALPVTAQLFRIRGTVESDVHASEVAADSSSLASSDAFVLHSGKSHKIYIWNGLGASAFEKQ 625
             |..:.| :.:||.:.||.|.:..|:||...||||.|:|.|||.:.|.  .|:|.|.|.|..|::
Zfish   509 GSSQSRP-SVRLFHVHGTNEFNTRATEVPPRSSSLNSNDVFVLSTDKC--CYLWYGKGCSGDERE 570

  Fly   626 AAVDRFSDYWDDVELEQVEEGAEPDEFWEELNGEGQY--DRSLGDDGAPLLESRLFHCHLSSGGF 688
            .| ...:|...:.|.:.:.||.||.:||..|.|:.||  ::.|.|:... :..|||.|...:|.|
Zfish   571 MA-KSLADIISEREKQVIAEGQEPADFWVNLGGKSQYASNKRLQDENIS-ITPRLFECSNQTGRF 633

  Fly   689 LKVEEVAQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEENGKLLDTAKLYFNLEPTARSFDTVS 753
            : ..|:..:.|:|||.||:||||..|::|||:|.|.::.|..:.:.||:.|....|..|..|| .
Zfish   634 I-ATEITNFNQDDLDEDDVMLLDIWDQVYLWIGKGANDTEKREAVVTAQEYLKSHPAGRDLDT-P 696

  Fly   754 IIRVPQGKEPRVFKRMFPNWDDNYWQNQPSYEDMKQLVIDANNEV 798
            ::.|.||.||..|...|..||...|....||:.:|..:.||.:.:
Zfish   697 VLVVKQGFEPPTFTGWFHAWDPQKWSEGKSYDQLKAELGDATDVI 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 57/106 (54%)
gelsolin_S2_like 191..283 CDD:200445 33/94 (35%)
gelsolin_S3_like 307..404 CDD:200448 42/97 (43%)
ADF_gelsolin 470..558 CDD:301701 27/99 (27%)
ADF_gelsolin 569..661 CDD:301701 35/91 (38%)
gelsolin_S6_like 675..774 CDD:200447 38/98 (39%)
vil1NP_956532.1 gelsolin_S1_like 18..122 CDD:200446 56/105 (53%)
gelsolin_S2_like 139..225 CDD:200445 33/85 (39%)
gelsolin_S3_like 252..350 CDD:200448 42/97 (43%)
gelsolin_S4_like 394..494 CDD:200449 24/100 (24%)
gelsolin_S5_like 515..605 CDD:200444 36/93 (39%)
gelsolin_S6_like 621..717 CDD:200447 38/97 (39%)
VHP 800..834 CDD:280388
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574406
Domainoid 1 1.000 70 1.000 Domainoid score I9475
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 443 1.000 Inparanoid score I1618
OMA 1 1.010 - - QHG55329
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 1 1.000 - - FOG0000527
OrthoInspector 1 1.000 - - otm24470
orthoMCL 1 0.900 - - OOG6_100298
Panther 1 1.100 - - O PTHR11977
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X232
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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