DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gel and Svil

DIOPT Version :10

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_001286919.1 Gene:Svil / 38306 FlyBaseID:FBgn0266696 Length:4526 Species:Drosophila melanogaster


Alignment Length:740 Identity:176/740 - (23%)
Similarity:284/740 - (38%) Gaps:196/740 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 LFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVE--KLKAISAANQIRDQD 256
            |..|||:.:|:.|.|....:|:|.||||||.|||.::.||||.|..:|  :.|.|.|| .:.::|
  Fly  3736 LLHVKGRTHVQTRLVEPVHTSLNRGDCFILVAGSQLFRYVGSFANVIEISRSKKICAA-IVENKD 3799

  Fly   257 HNGRARVQIV---DDFSTDADKQHFFDVLGSGSADQ--VPDESTADEDSAFERTDAAAVSLYKVS 316
            ....|..:::   ..:..:...:.|:.:||....||  :.:...||||..||.:......:|:..
  Fly  3800 LGCTATQEVILTDGKYLKERQWRQFW
QLLGKKEDDQSDIAECGHADEDDVFESSLIETNKIYEYQ 3864

  Fly   317 DAS--------GKL-KVDIIGQKPLTQAMLDTRECFILDTGSGIFVWVGKGATQKEKTDAMAKAQ 372
            |.:        |.: |||          |||||:..:.|.||.::||.||.|....|..||..||
  Fly  3865 DEALIPLEKFWGCIPKVD----------MLDTRKVLVFDFGSELYVWNGKNAPSDAKRAAMRLAQ 3919

  Fly   373 E-------------FLRTKKY-------------------PAWTQIHRIVEGSESAPFKQYFDTW 405
            |             :|....|                   |.|..:.:|.:..|:..||:.|..|
  Fly  3920 EHFGAENSADYADCYLNPLNYVAIVGRRENTKYAKRCAQRPEWCVLGKITQNMETVLFKEKFSDW 3984

  Fly   406 ---------RDAGMSHSRLIRSALGIGSDELLNDDEIDSVVTQLKKSGGRAFGFMPDHGQNVIET 461
                     :|...:...::|:..|....:.....|.:.|:.|.....|   .|..|     .:|
  Fly  3985 PEIEREDLEKDYLSNGVHMVRALNGTALHKGEPYQEPNLVLEQANLGRG---NFYYD-----TDT 4041

  Fly   462 ITQY-VAKPGSDEIVVSTVPF------DEKLPLLGFASYVLTYNYE------------ANNGDTG 507
            :..: |....:|:..:....|      |:........||::.:.|:            :|....|
  Fly  4042 MRHFDVITKSTDKWQIHEFNFDAANNRDDYGHFYSAESYIVRWIYQISVTVRELSGKVSNRSTVG 4106

  Fly   508 ---SLTYVWHGVKASA----AARKRAFEEGLVGSKDGLLVQTNQGHEPRHFYKIF---------K 556
               .:.:.|.|..:||    ||.....|   :..:.|..::.:||.|...|.::|         |
  Fly  4107 RDRCVYFTWQGQDSSANEKGAAALLTVE---LDKEKGAQMRVSQGDECTAFVRLFRQMWQHRGRK 4168

  Fly   557 GKLLTSFTALPVTAQLFRIRGTVESDVHASEVAADSSSLASSDAFVLHSGKSHKIYIWNGLGASA 621
            .:.|...:..    :|::::|.|..:....||...||.|.|..:.:|..|....:.:|:|..::.
  Fly  4169 EQCLERHSEW----RLYQLQGNVSEETIIKEVVCQSSHLRSRSSMLLIHGSQGNVIVWHGSKSAP 4229

  Fly   622 FEKQAAV------------DRFSDYWDDVELEQVEEGAEPDEFWEELNGEGQYDRSLG-----DD 669
            ..:..||            |.||.  :...|.:||||::.|          |..::||     ::
  Fly  4230 HTRNVAVGVAQDLIKTVPKDLFSA--ETANLTEVEEGSDDD----------QCKKALGLKDERNE 4282

  Fly   670 GAPLLES--------RLFHCHLSSGGFLKVEEVAQYEQEDLDS--------------DDIMLLDA 712
            ...||:|        |:|:...:.|.|..:|.......:||.|              ..|.|||.
  Fly  4283 YGSLLKSTKSFDYQIRIFNFSSTQGVFKALELSDPLRCQDLHSPYPFSQSQLYNARQPTIFLLDD 4347

  Fly   713 GDEIYLWVGY----------------------GVSE--EENGKLLDTAKLYFNL---EPTARSFD 750
            |||::||:|:                      ||:.  .|....|:||..|:..   |.....|.
  Fly  4348 GDELWLWMGWWPLEDVKINTDERSSPTNENRAGVNRWISERRAALETAVDYWRAKHGENENEPFH 4412

  Fly   751 TVSIIRVPQGKEPRVFKRMFPNWDD 775
            .:....|..|.||..||.:||:|.:
  Fly  4413 GIKGQVVWAGLEPLAFKALFPDWTE 4437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446
gelsolin_S2_like 191..283 CDD:200445 31/93 (33%)
gelsolin_S3_like 307..404 CDD:200448 34/137 (25%)
ADF_gelsolin 470..558 CDD:472830 22/121 (18%)
ADF_gelsolin 569..661 CDD:472830 24/103 (23%)
gelsolin_S6_like 675..774 CDD:200447 36/147 (24%)
SvilNP_001286919.1 gelsolin_S2_like 3733..3825 CDD:200445 30/89 (34%)
gelsolin_like 3859..3965 CDD:200436 29/115 (25%)
ADF_gelsolin <4069..4158 CDD:472830 18/91 (20%)
gelsolin_S5_like 4176..4279 CDD:200444 27/118 (23%)
ADF_gelsolin 4328..4435 CDD:472830 27/106 (25%)
VHP 4491..4526 CDD:460493
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.