DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gel and Vil1

DIOPT Version :9

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_001101694.1 Gene:Vil1 / 316521 RGDID:1307048 Length:827 Species:Rattus norvegicus


Alignment Length:750 Identity:267/750 - (35%)
Similarity:390/750 - (52%) Gaps:66/750 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHFWLGLETSTDEAGAA 133
            |||::|||||..:.|..|.:.:|.|:.||.::||..  :|....||:|:|:|:|.::|.||.|||
  Rat    16 TPGIQIWRIEAMQMVPVPSSTFGSFFDGDCYVVLAI--HKTGSTLSYDIHYWIGQDSSQDEQGAA 78

  Fly   134 AILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHVETNAQGETRLFQVK 198
            ||.|.|:||.|.|..|||||||.|||..|.||||.|:...:|||.:|.||||||:....||..||
  Rat    79 AIYTTQMDDYLKGRAVQHREVQGHESDTFRSYFKQGLVIRKGGVASGMKHVETNSCDVQRLLHVK 143

  Fly   199 GKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAANQIRDQDHNGRARV 263
            |||||...:|.:|..|.|.||.|:||.|..|..:.|.::.|:|:|:.::.|.:||||:..||..|
  Rat   144 GKRNVLAGEVEMSWKSFNRGDVFLLDLGKLIIQWNGPESNRMERLRGMTLAKEIRDQERGGRTYV 208

  Fly   264 QIVDDFSTDADKQHFFDVLGS--GSADQVPDESTADEDSAFERTDAAAVSLYKVSDASGKLKVDI 326
            .:||. ..:.|......::..  |...::   ..|..||..|....||:.||.|||:.||:.|..
  Rat   209 GVVDG-ENEGDSPQLMAIMNHVLGPRKEL---KAAISDSVVEPAAKAALKLYHVSDSEGKMVVRE 269

  Fly   327 IGQKPLTQAMLDTRECFILDTGS-GIFVWVGKGATQKEKTDAMAKAQEFLRTKKYPAWTQIHRIV 390
            :..:||||.:|...:|:|||.|. .||||.||.|..:|::.||.:|..|::.|:||..||:....
  Rat   270 VATQPLTQDLLSHEDCYILDQGGLKIFVWKGKNANAQERSGAMNQALNFIKAKQYPPSTQVEVQN 334

  Fly   391 EGSESAPFKQYFDTW----RDAGMSHSRLIRSALGIGSDELLNDDEIDSVVTQLKKSGGRAFGFM 451
            :|:|||.|:|.|..|    |.:|:..:..:.|.               :.|.|:|      |..:
  Rat   335 DGAESAIFQQLFQKWTVPNRTSGLGKTHTVGSV---------------AKVEQVK------FDAL 378

  Fly   452 PDHGQNVIETITQYVAKPGSDEIVVSTVPFDEKLPL--------LGFASYVLTYNYEANNGDTGS 508
            ..|.:..: ...|.:...||.|:.|..:...|.:|:        .|...|:|.|.|.....: ..
  Rat   379 SMHVRPQV-AAQQKMVDDGSGEVQVWRIEDLELVPVESKWLGHFYGGDCYLLLYTYLIGEKE-HY 441

  Fly   509 LTYVWHGVKAS----AAARKRAFEEGLVGSKDGLLVQTNQGHEPRHFYKIFKGKLL--------- 560
            |.|:|.|.:||    ||:..:|.......:.:.:.::...|.||.|...||||:::         
  Rat   442 LLYIWQGSQASQDEIAASAYQAVNLDQKYNDEPVQIRVTMGKEPPHLMSIFKGRMVVYQGGTSRK 506

  Fly   561 TSFTALPVTAQLFRIRGTVESDVHASEVAADSSSLASSDAFVLHSGKSHKIYIWNGLGASAFEKQ 625
            .:...:|.| :||::|||...:..|.||.|.::||.|:|.|:|.:...  .|:|.|.|.|..|::
  Rat   507 NNVEPVPST-RLFQVRGTSADNTKAFEVTARATSLNSNDVFILKTPSC--CYLWCGKGCSGDERE 568

  Fly   626 AAVDRFSDYWDDVELEQVEEGAEPDEFWEELNGEGQY--DRSLGDDGAPLLESRLFHCHLSSGGF 688
            .| ...:|.....|.:.|.||.||..||..|.|:..|  .:.|.::. .::..|||.|...:|.|
  Rat   569 MA-KMVADTISRTEKQVVVEGQEPANFWMALGGKAPYANTKRLQEEN-QVITPRLFECSNQTGRF 631

  Fly   689 LKVEEVAQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEENGKLLDTAKLYFNLEPTARSFDTVS 753
            | ..|:..:.|:||:.||:.|||..|:::.|:|...:|||......||:.|....|..|..:| .
  Rat   632 L-ATEIFDFTQDDLEEDDVFLLDVWDQVFFWIGKHANEEEKKAAATTAQEYLKTHPGNRDPET-P 694

  Fly   754 IIRVPQGKEPRVFKRMFPNWDDNYWQNQPSYEDMK 788
            ||.|.||.||..|...|..||...|.|..||:|:|
  Rat   695 IIVVKQGHEPSTFTGWFLAWDPFKWSNTKSYDDLK 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 53/106 (50%)
gelsolin_S2_like 191..283 CDD:200445 35/91 (38%)
gelsolin_S3_like 307..404 CDD:200448 44/97 (45%)
ADF_gelsolin 470..558 CDD:301701 27/99 (27%)
ADF_gelsolin 569..661 CDD:301701 34/91 (37%)
gelsolin_S6_like 675..774 CDD:200447 37/98 (38%)
Vil1NP_001101694.1 gelsolin_S1_like 17..121 CDD:200446 52/105 (50%)
gelsolin_S2_like 136..225 CDD:200445 35/89 (39%)
gelsolin_S3_like 250..348 CDD:200448 44/97 (45%)
gelsolin_S4_like 392..492 CDD:200449 24/100 (24%)
gelsolin_S5_like 513..603 CDD:200444 35/93 (38%)
gelsolin_S6_like 619..715 CDD:200447 37/97 (38%)
VHP 792..826 CDD:396679
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335147
Domainoid 1 1.000 91 1.000 Domainoid score I7502
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 456 1.000 Inparanoid score I1529
OMA 1 1.010 - - QHG55329
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 1 1.000 - - FOG0000527
OrthoInspector 1 1.000 - - otm45767
orthoMCL 1 0.900 - - OOG6_100298
Panther 1 1.100 - - O PTHR11977
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X232
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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