DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gel and Scin

DIOPT Version :10

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_942043.2 Gene:Scin / 298975 RGDID:735034 Length:715 Species:Rattus norvegicus


Alignment Length:759 Identity:280/759 - (36%)
Similarity:403/759 - (53%) Gaps:80/759 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ARRVMHPSFANAGRTPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHF 119
            |:.:.||.||.||:..||::||:|..|.|..|:..||.||.||:::||:|  .|..:..|:.:||
  Rat     2 AQELQHPEFARAGKQAGLQVWRVEKLELVPVPQGAYGDFYVGDAYLVLHT--TKSSRGFSYRLHF 64

  Fly   120 WLGLETSTDEAGAAAILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHV 184
            |||.|.|.||:.||||.|||:||.|.|.|||.||:|.:||..|:.|||.|::|:.|||.:|..||
  Rat    65 WLGKECSQDESTAAAIFTVQMDDYLGGKPVQSRELQGYESTDFVGYFKGGLKYKAGGVASGLNHV 129

  Fly   185 ETNAQGETRLFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAA 249
            .||.....||..|||:|.||..:|.||..|.|.|||||:|.|::||.:.||...:.|:|||...|
  Rat   130 LTNDLTAKRLLHVKGRRVVRATEVPLSWQSFNKGDCFIIDLGTEIYQWCGSSCNKYERLKASQVA 194

  Fly   250 NQIRDQDHNGRARVQIVDDFSTDADKQHFFDVLGSGSADQVPDESTADEDSAFERTDAAAVSLYK 314
            ..|||.:..||:::.:|::.|   :......||  |...::||... |:|...:.::.....||.
  Rat   195 TGIRDNERKGRSQLIVVEEGS---EPPELMKVL--GRKPELPDGDN-DDDVIADISNRKMAKLYM 253

  Fly   315 VSDASGKLKVDIIGQK-PLTQAMLDTRECFILDTGSG--IFVWVGKGATQKEKTDAMAKAQEFLR 376
            ||||||.:||.::.:: |.:..||...||||||.|:.  ||||.||.|..:|:..||..|:|||.
  Rat   254 VSDASGSMKVTLVAEENPFSMGMLLPEECFILDHGAAKQIFVWKGKNANPQERKTAMKTAEEFLH 318

  Fly   377 TKKYPAWTQIHRIVEGSESAPFKQYFDTWRDAGMSHSRLIRSALGIG----SDELLNDDEIDSVV 437
            ...|.|.|||..:.||.|:..|||:|..|:|...|.        |.|    ::::....:|....
  Rat   319 KMNYSANTQIQVLPEGGETPIFKQFFKDWKDKDQSD--------GFGKVYITEKVAQIKQIPFDA 375

  Fly   438 TQLKKSGGRAFGF-MPDHGQNVIETITQYVAKPGSDEIVVSTVPFDEKLPLLGFASYVLTYNYEA 501
            ::|..|...|... |.|.|...:|  ...|...|..:|..|:  :.|   ..|...|::.|.|  
  Rat   376 SKLHSSPQMAAQHNMVDDGSGGVE--IWRVENSGRVQIDPSS--YGE---FYGGDCYIILYTY-- 431

  Fly   502 NNGDTGSLTYVWHGVKAS------AAARKRAFEEGLVGSKDGLLVQTNQGHEPRHFYKIFKGKLL 560
               ..|.:.|.|.|..|:      :|......:..|.|  ..:.|:.:||.||.|...:||.|.|
  Rat   432 ---PRGQIIYTWQGADATRDELTMSAFLTVQLDRSLGG--QAVQVRVSQGKEPAHLLSLFKDKPL 491

  Fly   561 TSF----------TALPVTAQLFRIRGTVESDVHASEVAADSSSLASSDAFVLHSGKSHKIYIWN 615
            ..:          ...|.| :||::|..:.|.....||..|::||.|:|.|||...:::. :||.
  Rat   492 IIYKNGTSKKGGQAPAPPT-RLFQVRRNLASITRIVEVDVDANSLNSNDTFVLKLPRNNG-FIWI 554

  Fly   616 GLGASAFEKQAAVDRFSDYWDDV---ELEQVEEGAEPDEFWEELNGEGQYDRSLGDDGAPLLES- 676
            |.|||..|::.|     :|..||   :..:::||.||||||..|.|.|.|..|      ||||: 
  Rat   555 GKGASQEEEKGA-----EYVADVLKCKTTRIQEGKEPDEFWNSLGGRGDYQTS------PLLETQ 608

  Fly   677 ------RLFHCHLSSGGFLKVEEV-AQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEENGKLLD 734
                  ||:.|...:|.|: :||| .::.|:||..||:|||||.::|::|:|...:|.|..:.:.
  Rat   609 AEDHPPRLYGCSNKTGRFI-IEEVPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKKESVK 672

  Fly   735 TAKLYFNLEPTARSFDTVSIIRVPQGKEPRVFKRMFPNWDDNYW 778
            :||:|...:|:.|...| .|:.:.||.||..|...|..||.:.|
  Rat   673 SAKMYLETDPSGRDKRT-PIVIIKQGHEPPTFTGWFLGWDSSKW 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 57/112 (51%)
gelsolin_S2_like 191..283 CDD:200445 37/91 (41%)
gelsolin_S3_like 307..404 CDD:200448 46/99 (46%)
ADF_gelsolin 470..558 CDD:472830 24/93 (26%)
ADF_gelsolin 569..661 CDD:472830 36/94 (38%)
gelsolin_S6_like 675..774 CDD:200447 37/106 (35%)
ScinNP_942043.2 gelsolin_S1_like 10..121 CDD:200446 57/112 (51%)
gelsolin_S2_like 136..225 CDD:200445 38/93 (41%)
gelsolin_S3_like 246..346 CDD:200448 46/99 (46%)
gelsolin_S4_like 390..486 CDD:200449 27/109 (25%)
gelsolin_S5_like 508..598 CDD:200444 37/96 (39%)
gelsolin_S6_like 613..711 CDD:200447 36/99 (36%)

Return to query results.
Submit another query.