DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gel and Scin

DIOPT Version :9

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_001139668.1 Gene:Scin / 20259 MGIID:1306794 Length:715 Species:Mus musculus


Alignment Length:759 Identity:279/759 - (36%)
Similarity:405/759 - (53%) Gaps:80/759 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ARRVMHPSFANAGRTPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHF 119
            |:.:.||.||.||:..||::||:|..|.|..|:..||.||.||:::||:|  .|..:..|:.:||
Mouse     2 AQELQHPEFARAGQQAGLQVWRVEKLELVPVPQGAYGDFYVGDAYLVLHT--TKSSRGFSYRLHF 64

  Fly   120 WLGLETSTDEAGAAAILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHV 184
            |||.|.|.||:.||||.|||:||.|.|.|||.||:|.:||..|:.|||.|::|:.|||.:|..||
Mouse    65 WLGKECSQDESTAAAIFTVQMDDYLGGKPVQSRELQGYESTDFVGYFKGGLKYKAGGVASGLNHV 129

  Fly   185 ETNAQGETRLFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAA 249
            .||.....||..|||:|.||..:|.||..|.|.|||||:|.|::||.:.||...:.|:|||...|
Mouse   130 LTNDLTAKRLLHVKGRRVVRATEVPLSWESFNKGDCFIIDLGTEIYQWCGSSCNKYERLKASQVA 194

  Fly   250 NQIRDQDHNGRARVQIVDDFSTDADKQHFFDVLGSGSADQVPDESTADEDSAFERTDAAAVSLYK 314
            ..|||.:..||:::.:|::.|   :......||  |...::||... |:|...:.::.....||.
Mouse   195 IGIRDNERKGRSQLIVVEEGS---EPSELMKVL--GRKPELPDGDN-DDDVVADISNRKMAKLYM 253

  Fly   315 VSDASGKLKVDIIGQK-PLTQAMLDTRECFILDTGSG--IFVWVGKGATQKEKTDAMAKAQEFLR 376
            ||||||.:||.::.:: |.:..||.:.||||||.|:.  ||||.||.|..:|:..||..|:|||:
Mouse   254 VSDASGSMKVTLVAEENPFSMGMLLSEECFILDHGAAKQIFVWKGKNANPQERKTAMKTAEEFLQ 318

  Fly   377 TKKYPAWTQIHRIVEGSESAPFKQYFDTWRDAGMSHSRLIRSALGIG----SDELLNDDEIDSVV 437
            ..||...|||..:.||.|:..|||:|..|:|...|.        |.|    ::::....:|....
Mouse   319 KMKYSTNTQIQVLPEGGETPIFKQFFKDWKDKDQSD--------GFGKVYITEKVAQIKQIPFDA 375

  Fly   438 TQLKKSGGRAFGF-MPDHGQNVIETITQYVAKPGSDEIVVSTVPFDEKLPLLGFASYVLTYNYEA 501
            ::|..|...|... |.|.|...:|  ...|...|..:|..|:  :.|   ..|...|::.|.|  
Mouse   376 SKLHSSPQMAAQHNMVDDGSGGVE--IWRVENSGRVQIDPSS--YGE---FYGGDCYIILYTY-- 431

  Fly   502 NNGDTGSLTYVWHGVKAS------AAARKRAFEEGLVGSKDGLLVQTNQGHEPRHFYKIFKGKLL 560
               ..|.:.|.|.|..|:      :|......:..|.|  ..:.|:.:||.||.|...:||.|.|
Mouse   432 ---PRGQIIYTWQGANATRDELTMSAFLTVQLDRSLGG--QAVQVRVSQGKEPAHLLSLFKDKPL 491

  Fly   561 TSF----------TALPVTAQLFRIRGTVESDVHASEVAADSSSLASSDAFVLHSGKSHKIYIWN 615
            ..:          ...|.| :||::|..:.|.....||..|::||.|:|.|||...:::. :||.
Mouse   492 IIYKNGTSKKEGQAPAPPT-RLFQVRRNLASITRIVEVDVDANSLNSNDTFVLKLPRNNG-FIWI 554

  Fly   616 GLGASAFEKQAAVDRFSDYWDDV---ELEQVEEGAEPDEFWEELNGEGQYDRSLGDDGAPLLES- 676
            |.|||..|::.|     :|..||   :..:::||.||:|||..|.|.|.|..|      ||||: 
Mouse   555 GKGASQEEEKGA-----EYVADVLKCKASRIQEGKEPEEFWNSLGGRGDYQTS------PLLETR 608

  Fly   677 ------RLFHCHLSSGGFLKVEEV-AQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEENGKLLD 734
                  ||:.|...:|.|: :||| .::.|:||..||:|||||.::|::|:|...:|.|..:.:.
Mouse   609 AEDHPPRLYGCSNKTGRFI-IEEVPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKKESVK 672

  Fly   735 TAKLYFNLEPTARSFDTVSIIRVPQGKEPRVFKRMFPNWDDNYW 778
            :||:|...:|:.|...| .|:.:.||.||..|...|..||.:.|
Mouse   673 SAKMYLETDPSGRDKRT-PIVIIKQGHEPPTFTGWFLGWDSSRW 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 57/112 (51%)
gelsolin_S2_like 191..283 CDD:200445 37/91 (41%)
gelsolin_S3_like 307..404 CDD:200448 46/99 (46%)
ADF_gelsolin 470..558 CDD:301701 24/93 (26%)
ADF_gelsolin 569..661 CDD:301701 35/94 (37%)
gelsolin_S6_like 675..774 CDD:200447 37/106 (35%)
ScinNP_001139668.1 Actin-severing. /evidence=ECO:0000255 1..363 162/376 (43%)
gelsolin_S1_like 10..121 CDD:200446 57/112 (51%)
Polyphosphoinositide binding. /evidence=ECO:0000250 112..119 3/6 (50%)
gelsolin_S2_like 136..225 CDD:200445 38/93 (41%)
Polyphosphoinositide binding. /evidence=ECO:0000250 138..146 5/7 (71%)
gelsolin_S3_like 246..346 CDD:200448 46/99 (46%)
Ca(2+)-dependent actin binding 364..715 116/379 (31%)
gelsolin_S4_like 390..486 CDD:200449 27/109 (25%)
gelsolin_S5_like 508..598 CDD:200444 36/96 (38%)
gelsolin_S6_like 613..711 CDD:200447 36/99 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831415
Domainoid 1 1.000 91 1.000 Domainoid score I7668
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 461 1.000 Inparanoid score I1548
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55329
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 1 1.000 - - FOG0000527
OrthoInspector 1 1.000 - - otm43689
orthoMCL 1 0.900 - - OOG6_100298
Panther 1 1.100 - - O PTHR11977
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2540
SonicParanoid 1 1.000 - - X232
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.840

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