DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gel and gsnl-1

DIOPT Version :9

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_505448.1 Gene:gsnl-1 / 179328 WormBaseID:WBGene00010593 Length:475 Species:Caenorhabditis elegans


Alignment Length:739 Identity:208/739 - (28%)
Similarity:301/739 - (40%) Gaps:277/739 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 MHPSFANAGRTPGLEIWRIENF--EPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHFWL 121
            :.|:.|..|:..||.:|||..|  |||  |:.::|.||.||::|.|   ..|.|.  .|||||||
 Worm     6 LDPALAEIGKKNGLLVWRINKFVLEPV--PEVDHGVFYIGDAYIAL---YQKYDG--CWDVHFWL 63

  Fly   122 GLETSTDEAGAAAILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHVET 186
            |...||||.|.|||.||::||.|.|.|.||||:|::||.||||||.:||||..||..:|::||:.
 Worm    64 GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGYRHVDD 128

  Fly   187 NAQG-ETRLFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAAN 250
            ..:. :..||..|||||||..:|...|:|:|.||.||||.|.|:||::..::.|:|::|.::.|.
 Worm   129 QFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPPESGRLERIKGMARAK 193

  Fly   251 QIRDQDHNGRARVQIVDDFSTDADKQHFFDVLGSGSADQVPDESTADEDSAFERTDAAAVSLYKV 315
            .|.|.:..|..:|.|:||...|.|.. |:...|..|:.:...:...|:|:.::|. ...::|:||
 Worm   194 NIADHERMGIPKVHILDDVEWDNDST-FWSYFGGVSSVRKVSKGKDDDDNYWKRL-TEQITLWKV 256

  Fly   316 SDASGKLKVDIIGQ-KPLTQAMLDTRECFILDT-GSGIFVWVGKGATQKEKTDAMAKAQEFLRTK 378
            |||||..||.::.| :.:.:..||.::.||||. ..|||||:|...|.:|::.|:...|.:|:..
 Worm   257 SDASGAAKVSMVSQGENIRKEQLDPKDAFILDAINGGIFVWIGHECTLEERSKALIWGQNYLKQH 321

  Fly   379 KYPAWTQIHRIVEGSESAPFKQYFDTWRDAGMSHSRLIRSALGIGSDELLNDDEIDSVVTQLKKS 443
            ..|.|||:.|::|.:||..|.|:|..|                                      
 Worm   322 HLPRWTQVTRVLESAESTQFTQWFRDW-------------------------------------- 348

  Fly   444 GGRAFGFMPDHGQNVIETITQYVAKPGSDEIVVSTVPFDEKLPLLGFASYVLTYNYEANNGDTGS 508
                                                 .|||                        
 Worm   349 -------------------------------------VDEK------------------------ 352

  Fly   509 LTYVWHGVKASAAARKRAFEEGLVGSKDGLLVQTNQGHEPRHFYKIFKGKLLTSFTALPVTAQLF 573
                          :|..|                                         |..||
 Worm   353 --------------KKNTF-----------------------------------------TPLLF 362

  Fly   574 RIRGTVESDVHASEVAADSSSLASSDAFVLHSGKSHKIYIWNGLGASAFEKQAAVDRFSDYWDDV 638
            ::              :|.|                                             
 Worm   363 QV--------------SDES--------------------------------------------- 368

  Fly   639 ELEQVEEGAEPDEFWEELNGEGQYDRSLGDDGAPLLESRLFHCHLSSGGFLKVEEVAQYEQEDLD 703
                                                            |.|.|||:|.:.|||||
 Worm   369 ------------------------------------------------GLLHVEEIANFTQEDLD 385

  Fly   704 SDDIMLLDAGDEIYLWVGYGVSEEENGKLLDTAKLYFNLEPTARSFDTVSIIRVPQGKEPRVFKR 768
            .||:|:|||.:.||:|||...:..|..:.|:|||||...:...|...| :|..:.|||||..||:
 Worm   386 GDDVMILDALNSIYVWVGANANANEKKEALNTAKLYLEKDKLPRHKKT-AIDTIFQGKEPPTFKK 449

  Fly   769 MFPNWDDNYWQNQ-PSYEDMKQLV 791
            .||:||||.::|: .|.::|::|:
 Worm   450 FFPSWDDNLFKNEVRSVQNMRRLL 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 61/114 (54%)
gelsolin_S2_like 191..283 CDD:200445 37/91 (41%)
gelsolin_S3_like 307..404 CDD:200448 39/98 (40%)
ADF_gelsolin 470..558 CDD:301701 5/87 (6%)
ADF_gelsolin 569..661 CDD:301701 5/91 (5%)
gelsolin_S6_like 675..774 CDD:200447 41/98 (42%)
gsnl-1NP_505448.1 gelsolin_S1_like 12..118 CDD:200446 60/112 (54%)
gelsolin_S2_like 134..225 CDD:200445 37/91 (41%)
gelsolin_S3_like 249..347 CDD:200448 39/97 (40%)
gelsolin_S6_like 359..455 CDD:200447 45/203 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158300
Domainoid 1 1.000 86 1.000 Domainoid score I5179
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H121987
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto19256
orthoMCL 1 0.900 - - OOG6_100298
Panther 1 1.100 - - LDO PTHR11977
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2540
SonicParanoid 1 1.000 - - X232
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.740

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