DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gel and Avil

DIOPT Version :10

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:XP_006513161.1 Gene:Avil / 11567 MGIID:1333798 Length:878 Species:Mus musculus


Alignment Length:843 Identity:289/843 - (34%)
Similarity:418/843 - (49%) Gaps:127/843 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LCSAGTLNARPAFPVQSGEIQPSGQNSKQAARRVMHPSFANAGRTPGLEIWRIENFEPVIYPKTN 89
            :|..|.:::.....:..|:     .:|::.|...:..:|......|.:..||||..|..:.|.:.
Mouse     3 VCFKGNVSSLWPRALDQGD-----SSSRKTATMSLSSAFRAVSNDPRIITWRIEKMELALVPLSA 62

  Fly    90 YGKFYTGDSFIVLNTIENKKDKKLSWDVHFWLGLETSTDEAGAAAILTVQLDDLLNGGPVQHREV 154
            :|.||.||.:|||:|  .:....||.::|||:|.::|.||...|||.|.||||.|.|.|||||||
Mouse    63 HGNFYEGDCYIVLST--RRVGSLLSQNIHFWIGKDSSQDEQSCAAIYTTQLDDYLGGSPVQHREV 125

  Fly   155 QDHESQLFLSYFKNGIRYEQGGVGTGFKHVETNAQGETRLFQVKGKRNVRV-------------- 205
            |.|||..|..|||.||.|::|||.:|.||||||.....||..||||||::.              
Mouse   126 QYHESDTFRGYFKQGIIYKKGGVASGMKHVETNTYDVKRLLHVKGKRNIQATEVSLTRECPGCPV 190

  Fly   206 ----------------RQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAANQIRD 254
                            .||.:|..|.|.||.|:||.|..|..:.|.::...|:|||:..|..|||
Mouse   191 LPPWHLRLPRTALTAHTQVEMSWDSFNRGDVFLLDLGMVIIQWNGPESNSGERLKAMLLAKDIRD 255

  Fly   255 QDHNGRARVQIVDDFSTDADKQH--------FFDVLGSGSADQVPDESTADEDSAFERTDAAAVS 311
            ::..|||.:.::     :.||:.        ..|.||..|..:     .|..|...::...:::.
Mouse   256 RERGGRAEIGVI-----EGDKEAASPGLMTVLQDTLGRRSMIK-----PAVSDEIMDQQQKSSIM 310

  Fly   312 LYKVSDASGKLKVDIIGQKPLTQAMLDTRECFILD-TGSGIFVWVGKGATQKEKTDAMAKAQEFL 375
            ||.|||.:|:|.|..:..:||.|.:|:..:|:||| :|:.|:||.|||||:.||..||:||.:|:
Mouse   311 LYHVSDTAGQLSVTEVATRPLVQDLLNHDDCYILDQSGTKIYVWKGKGATKVEKQAAMSKALDFI 375

  Fly   376 RTKKYPAWTQIHRIVEGSESAPFKQYFDTW--RDAGMSHSRLIRSALGIGSDELLNDDEIDSVVT 438
            :.|.||:.|.:..:.:|:|||.|||.|..|  :|          ...|:|               
Mouse   376 KMKGYPSSTNVETVNDGAESAMFKQLFQKWSVKD----------QTTGLG--------------- 415

  Fly   439 QLKKSGGRAFGFMPDHGQNVIETITQYVAK-----PGSDEIVVSTVPFDEKLPL--------LGF 490
            ::..:|..|..|......:::.|..:..|:     .|..::.|..:...|.:|:        .|.
Mouse   416 KIFSTGKIAKIFQDKFDVSLLHTKPEVAAQERMVDDGKGQVEVWRIENLELVPVEYQWHGFFYGG 480

  Fly   491 ASYVLTYNYEANNGDTGSLTYVWHGVKAS----AAARKRAFEEGLVGSK-DGLLVQ--TNQGHEP 548
            ..|::.|.|:. ||....:.|:|.|..||    ||:..||.|   |..: ||..||  .:.|.||
Mouse   481 DCYLVLYTYDV-NGKPHYILYIWQGRHASRDELAASAYRAVE---VDQQFDGAPVQVRVSMGKEP 541

  Fly   549 RHFYKIFKGKLL-----TSFTA-----LPVTAQLFRIRGTVESDVHASEVAADSSSLASSDAFVL 603
            |||..||||||:     ||...     .||  :||:|.|..:|:..|.||:|.:|||.|:|.|:|
Mouse   542 RHFMAIFKGKLVIYEGGTSRKGNEEPDPPV--RLFQIHGNDKSNTKAVEVSASASSLNSNDVFLL 604

  Fly   604 HSGKSHKIYIWNGLGASAFEKQAAVDRFSDYWDDVELEQVEEGAEPDEFWEELNGEGQY--DRSL 666
            .:...|  |:|.|.|:|. :::|......|...|...:.|.||.||.|||:.|.|:..|  |:.|
Mouse   605 RTQAEH--YLWYGKGSSG-DERAMAKELVDLLCDGNADTVAEGQEPPEFWDLLGGKTAYANDKRL 666

  Fly   667 GDDGAPLLESRLFHCHLSSGGFLKVEEVAQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEENGK 731
            ..:... ::.|||.|...:|.|| |.||..:.||||...|:||||..|:::||:|...:..|...
Mouse   667 QQETLD-VQVRLFECSNKTGRFL-VTEVTDFTQEDLSPGDVMLLDTWDQVFLWIGAEANATEKKG 729

  Fly   732 LLDTAKLYFNLEPTARSFDTVSIIRVPQGKEPRVFKRMFPNWDDNYWQNQPSYEDMKQLVIDA 794
            .|.||:.|....|:.|..|| .|:.:.||.||..|...|..||.:.|....|||.:|..:.||
Mouse   730 ALSTAQEYLVTHPSGRDPDT-PILIIKQGFEPPTFTGWFLAWDPHIWSEGKSYEQLKNELGDA 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 54/112 (48%)
gelsolin_S2_like 191..283 CDD:200445 35/129 (27%)
gelsolin_S3_like 307..404 CDD:200448 44/97 (45%)
ADF_gelsolin 470..558 CDD:472830 34/102 (33%)
ADF_gelsolin 569..661 CDD:472830 35/91 (38%)
gelsolin_S6_like 675..774 CDD:200447 39/98 (40%)
AvilXP_006513161.1 gelsolin_S1_like 36..147 CDD:200446 54/112 (48%)
gelsolin_S2_like 162..282 CDD:200445 34/124 (27%)
gelsolin_S3_like 306..404 CDD:200448 44/97 (45%)
gelsolin_S4_like 448..548 CDD:200449 31/103 (30%)
gelsolin_S5_like 569..658 CDD:200444 37/93 (40%)
gelsolin_S6_like 676..771 CDD:200447 39/96 (41%)
VHP 843..878 CDD:460493
Blue background indicates that the domain is not in the aligned region.

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