DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment east and AT3G49601

DIOPT Version :10

Sequence 1:NP_001245484.1 Gene:east / 46006 FlyBaseID:FBgn0261954 Length:2342 Species:Drosophila melanogaster
Sequence 2:NP_001118799.1 Gene:AT3G49601 / 6241216 AraportID:AT3G49601 Length:591 Species:Arabidopsis thaliana


Alignment Length:303 Identity:55/303 - (18%)
Similarity:111/303 - (36%) Gaps:115/303 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NIVELFCGIPSLVMMICFLFLMGFSKVYKNAFYKLVQMDLL-INLLVYTNTLLSLRLELLPFCIF 85
            |:.|:.|        |....::|..:.       |:.:.|| :||:  |:.|.:..|...|..:.
plant   768 NVGEVVC--------IFLTAILGLPEA-------LIPVQLLWVNLV--TDGLPATALGFNPPDLD 815

  Fly    86 ILKFI-----EKSVPGFLTWTKYFA--------------WWFLHIQFLSAASLTVHRISAIYWPY 131
            |::.:     |..:.|:| :.:|.|              ||||:.:  ....:|.:::       
plant   816 IMEKLPRNPREPLISGWL-FFRYLAIGVYVGLATVGAATWWFLYDE--DGPQVTFYQL------- 870

  Fly   132 KYDKFWSKYYLHCGLAFALYSFLPTFFWLDFAIKVEIQNETLVTIVYPEVLAKANNVTAIFTVLY 196
                   ::::.|      .|..|.|..:|..:   .::.      ||..:|    ::.:.|:  
plant   871 -------RHFMKC------TSDNPLFSGIDCDV---FESR------YPTTMA----LSVLVTI-- 907

  Fly   197 FIIFIALGVMASAYFSKQQQILSTMHETVSKKLTRIAITYCIVFTGVLSWTVLTSLNNLFRLLPD 261
                    .|.:|        |:::.|  ::.|.|:.....|...|.:          :..:...
plant   908 --------EMCNA--------LNSLSE--NQSLLRMPPWLNIWLLGAI----------IMSMALH 944

  Fly   262 FLLRFIQPLLLYSSDL----------MTLSLPYILLVFDSNVK 294
            ||:.:|:|:.|....:          :.:|||.|||  |..:|
plant   945 FLILYIKPMPLVFQVIPLNWSQWVVVLKISLPVILL--DEGLK 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eastNP_001245484.1 None
AT3G49601NP_001118799.1 cwf21_SRRM2-like 54..99 CDD:410600
PRK12678 318..>560 CDD:237171
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.