DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment east and srrm2

DIOPT Version :9

Sequence 1:NP_001245484.1 Gene:east / 46006 FlyBaseID:FBgn0261954 Length:2342 Species:Drosophila melanogaster
Sequence 2:NP_001025246.2 Gene:srrm2 / 553531 ZFINID:ZDB-GENE-050522-399 Length:1282 Species:Danio rerio


Alignment Length:1394 Identity:257/1394 - (18%)
Similarity:427/1394 - (30%) Gaps:457/1394 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRKVPGGSGGADESTAAAAPLDDNANASV--------------EIPDSSEEPAMGVGEEMSIISK 53
            :|...||.....:.....:.|:...||.:              |:.|..||......|   |..|
Zfish    31 NRDERGGERDEKDKERLESQLNRQPNADILEHQRKRQLEVKCAELQDMMEEQGYSAEE---IEEK 92

  Fly    54 TRTSTLSVEPAKEPTVTAELEGEKELESNPVSKTPRSTPTPTLTPAVTPTASDGVA--AKSVRVT 116
            ..|..|.::..:||                       .|.||...|||.|.:...|  .|:.|: 
Zfish    93 VNTFRLMLQERQEP-----------------------APPPTEKTAVTETHALAAANQQKNDRL- 133

  Fly   117 RHSSPLLLIISPTTSRREVGDGELDTEEPTGSGGQRKSSVERSLAPVIRGRKSIKDLKEAKEVKS 181
                           |:..|   :.::...||          |..|         |.||.::.|.
Zfish   134 ---------------RQAFG---ISSDYVDGS----------SFNP---------DRKEREKEKR 161

  Fly   182 EEPPAAASESRAASGVTPGQVKEQHVADGNEMESLPITDKKDHKDTKDKGDERETDQ-------- 238
            |:......:.         |.::..:.:.::.:| ....||..|..|.|...||:.:        
Zfish   162 EQERLEREKQ---------QQQQYQIIESDDSDS-STEPKKSRKKKKKKNKSRESSESPSPSPHR 216

  Fly   239 ----EEEKEKSADTEIIADTEKTSEKQKYTEKDKAADKDG------------------------- 274
                :::|:|..:..:.:|||.:|..:|.|.|.|....|.                         
Zfish   217 EKKKDKKKKKKREESVNSDTESSSSDEKETSKGKRKRSDNEAPPPSKSRRRQSASSSPARSQSPQ 281

  Fly   275 -GKEKDIDANKDIDKEKEKVKEVLPP-------------------VVPIAPVTPTCNRVTRKSHA 319
             ||::     |..|...|:|::...|                   ..|....||..|:..:....
Zfish   282 RGKQQ-----KKTDSRPEEVRKGRSPDRRRRGRSQESPKRMEIRERSPRRSRTPEQNKRYKGRER 341

  Fly   320 QEQAINTRVTRNRRQSSTVGANSTASLVAASSSVTEQPPPSRGRRKKPVVVAPPLEPAVKRKRSQ 384
            :.:.:..:..|.|..||:........|.....|...:.||...|........||      .|:.|
Zfish   342 EREQLQEKPQRKRNDSSSRSPPPKQQLDRRPRSEEREKPPQTRRHDSSSPSPPP------NKQRQ 400

  Fly   385 DVEADSDANNSTKYSKVEVVKSEEAEAPEEDSSAVPIKQE---SVDG--NEV------SSISPTV 438
            |....|:          |.:|:...:.|:....:...||:   ..||  |:|      ||.|.|.
Zfish   401 DRRQRSE----------ERLKAPLRKRPDSSPRSPSPKQQRDRRDDGKKNKVQSRHDSSSSSSTS 455

  Fly   439 TPTPTPAP-------------TPAPVPGSR---------------------RGR----GRPQNRN 465
            :|:|:|:|             ..||.|..|                     |||    .:.|.||
Zfish   456 SPSPSPSPRKDRMRRGHSGEKARAPSPRDREKERARGGERISDRDKSRKEDRGRDGDKAKEQARN 520

  Fly   466 SSSPATTTRATRLSKAGSPVI--------LTPVAQEPAPPKRRRV-------------------- 502
            .||.:       :|...||..        |....||....::||.                    
Zfish   521 RSSDS-------VSPKRSPFANGRQKERELEKERQEQRDREKRREEEMREEALRKARESDREKER 578

  Fly   503 GSSTRKTVSASSLAPSS-------QGGAGDEDSKDSMASS--MDDLLMAAADIKQEKLTPDFDDS 558
            ..|.|:.||.|....||       :|..|.|..::.:...  |::      |.:|||..|     
Zfish   579 NRSRREEVSHSDRTSSSRCQPENRRGIRGSEAEQEVLKKDRRMEE------DKRQEKSPP----- 632

  Fly   559 LMPEGLPSTSGASSANGHSCTEPLTVDTEINVKPADSKVKPKESPVVAVEESPSQSETQSAKVSA 623
                             |...|.|....:...|.....|....|...:...|.|:|::.|:..|:
Zfish   633 -----------------HQKMEKLAQKEKTGQKDKAKAVSSSSSSSSSSSSSNSESDSDSSSSSS 680

  Fly   624 HAGKAPSLSPDMISEGVSAVSVRKFYKKPEFLENNLGIEKDPELGEIVQTVSNNDTETDVEMAVD 688
            .:..:.|.|.....:.         .||.:..:::....|......|.|.::..:.|..|.   :
Zfish   681 SSSSSSSSSSSSSDDD---------KKKKQSSKDSTSASKSVPNAVIAQAIARREKENRVR---N 733

  Fly   689 GEVNQ-------------PSTPKSQ----DKKKEEQEKNQKSGLKAA-----------KKAPAKL 725
            ||.::             |..|:|:    :||:.:.|:.::.|..::           |:.....
Zfish   734 GESDEGRKTYPPIQRQSSPPEPQSKRDDVEKKQRDPERERRPGQSSSSFTVMNDRERGKERYTPT 798

  Fly   726 EPKAEDISEILTDVPVDISTEAVEIIEEAEEDTCSNSSIK--------PGELRLDESNDEPELLL 782
            |..:..:|.     |..:...|.::.|.......|.|..:        |.||..:.|...|.   
Zfish   799 ETSSPPLSP-----PQRVLDRAAQVGERYMPSGESQSQSRGRGGERYSPSELEQESSRPSPS--- 855

  Fly   783 EDALIVNGDENET-------PDQPEEK----EDQVEFFHT---------GEYDDFEHEIMVELAK 827
                  .|.:.::       |..|.||    ..||:...:         .:|.|.:..:... .:
Zfish   856 ------RGRDRQSDQRKEAPPLSPREKGRIDAPQVKQAASRPSPKRTPPRQYQDPQRSLSPS-PR 913

  Fly   828 EGV-------------LDASGNALSQQKVELEHPEDVTLHESKNDIEAEESVERKP--------- 870
            .||             .|.|...|.::......|.|.. .|...:.....|..|.|         
Zfish   914 RGVRRLSPPRNYSPSRRDRSRERLRERDRFRARPADRD-RERSRERRTRNSRSRSPRRPSPPYRS 977

  Fly   871 LKDPSVAD--------EMEDMNEESYIDIKDQTNQLLVEHLAEEAMEADCGPED---NKENLSTS 924
            .:.||.|.        ..|...|:.....:::..|...|...|........|:|   .:.:.|:|
Zfish   978 RRSPSPARRRRSSRSLSREREREQERRRNRERDRQREQEREKEREQRTRVPPKDLTPPRRSPSSS 1042

  Fly   925 ASSTAADGLDIQLAIK----EDDDEEKPLAVIADEQKPGLLLTNDMKVDEKPNGKQESVCDEHVQ 985
            :||:::.....|..::    .|.|:::                 ..:.:|:...||.....:|..
Zfish  1043 SSSSSSSSPSPQRPMRGVKPTDTDKDR-----------------SREANEQARNKQPERTSKHRS 1090

  Fly   986 LVPNLRQEQEIHLQNLGLLTHQAAEHRRKCLLEAQARQAQMQLQQHHH-HQHKRQGARGGGSATH 1049
              |:..:|..:.|.    |:::....|.|..........:::.|.... |:...:|.......:.
Zfish  1091 --PSSPRESRLSLP----LSYRDVPARSKSPTSTDPPGGRLRRQSPTSVHEPSARGKTAVNGKSE 1149

  Fly  1050 VESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGGCGSSSASSTSSSSVGSATRKSSGTLGSGA 1114
            .||||.     :..|||:...|                |||:||:||||..|:....|......|
Zfish  1150 KESSGK-----QQKRSSSSSSS----------------SSSSSSSSSSSSSSSDSSDSEAEKEKA 1193

  Fly  1115 GAGAGVRRQSLKMTFQKGRARGHGAADRS 1143
            |..|...:.:.|..  ||||....::..|
Zfish  1194 GVKASTNKNAGKTA--KGRASSSSSSSES 1220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eastNP_001245484.1 PHA03307 295..>535 CDD:223039 67/342 (20%)
srrm2NP_001025246.2 cwf21 61..103 CDD:285507 9/44 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR36562
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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