DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and TGFB3

DIOPT Version :10

Sequence 1:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_003230.1 Gene:TGFB3 / 7043 HGNCID:11769 Length:412 Species:Homo sapiens


Alignment Length:461 Identity:108/461 - (23%)
Similarity:177/461 - (38%) Gaps:125/461 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLNVFFLTSLFYAASATTYVTTN-NHIEMPIYQKRPLSEQMEMIDILDLGDRPRRQAEPN----- 59
            :|| |...||    |.:|..|.: .||:    :||..:.:.:::..|.|...|    ||.     
Human    14 LLN-FATVSL----SLSTCTTLDFGHIK----KKRVEAIRGQILSKLRLTSPP----EPTVMTHV 65

  Fly    60 ------LHNSASKFLLEVYNE-----ISEDQEPKEVLHQRHKRSLDDDILISNEDRQEIASCNSI 113
                  |:||..:.|.|::.|     ..|:.|.:....:.||    .|::....:..|:|.|   
Human    66 PYQVLALYNSTRELLEEMHGEREEGCTQENTESEYYAKEIHK----FDMIQGLAEHNELAVC--- 123

  Fly   114 LTFSSRLKPEQLDNELDMHITFNTNDVPVD-LSLVQAMLRIYKQPSLVDRRANFTVSVYRKLDNR 177
                    |:.:.:::   ..||.:.|..: .:|.:|..|:.:.|:...:|....:.:::.|  |
Human   124 --------PKGITSKV---FRFNVSSVEKNRTNLFRAEFRVLRVPNPSSKRNEQRIELFQIL--R 175

  Fly   178 QD---FSYRILGSVN-TTSSQRGWLEFNLTDTLRYWLHNKGLQRRNELRISIG-DSQLSTFAAGL 237
            .|   ...|.:|..| .|.....||.|::|||:|.||    |:|.:.|.:.|. .....||    
Human   176 PDEHIAKQRYIGGKNLPTRGTAEWLSFDVTDTVREWL----LRRESNLGLEISIHCPCHTF---- 232

  Fly   238 VTPQASRTSLEPFIVGYFNGP--ELLVKIQKLRFK----------RDLEKRRAGGGSPPPP---- 286
                      :|      ||.  |.:.::.:::||          .||.:.:.......|.    
Human   233 ----------QP------NGDILENIHEVMEIKFKGVDNEDDHGRGDLGRLKKQKDHHNPHLILM 281

  Fly   287 --PPPPVDLYRPPQSCER------LNFT--------------VDFKELHMHNWVIAPKKFEAYFC 329
              ||..:|  .|.|..:|      .|:.              :||::.....||..||.:.|.||
Human   282 MIPPHRLD--NPGQGGQRKKRALDTNYCFRNLEENCCVRPLYIDFRQDLGWKWVHEPKGYYANFC 344

  Fly   330 GGGCNFPLGTKMNATNHAIVQTLMHLKQPHL-PKPCCVPTVLGAITILRYLNEDIIDLTKYQKAV 393
            .|.|.:   .:...|.|:.|..|.:...|.. ..|||||..|..:|||.|:.. ...:.:....|
Human   345 SGPCPY---LRSADTTHSTVLGLYNTLNPEASASPCCVPQDLEPLTILYYVGR-TPKVEQLSNMV 405

  Fly   394 AKECGC 399
            .|.|.|
Human   406 VKSCKC 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 51/236 (22%)
TGF_beta_BMP5_like 299..400 CDD:381639 32/122 (26%)
TGFB3NP_003230.1 TGFb_propeptide 24..231 CDD:459906 54/238 (23%)
Cell attachment site. /evidence=ECO:0000250|UniProtKB:P01137 261..263 0/1 (0%)
TGF_beta_TGFB3 312..412 CDD:381656 30/104 (29%)

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