DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scw and BMP6

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001709.1 Gene:BMP6 / 654 HGNCID:1073 Length:513 Species:Homo sapiens


Alignment Length:451 Identity:127/451 - (28%)
Similarity:194/451 - (43%) Gaps:94/451 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QKRPLSEQMEMIDILDLGDRPR-------------RQAE--------------PNLHNSASKFLL 69
            :||.:  |.|::.:|.|..|||             ||.|              |....||..|:|
Human    75 EKREM--QKEILSVLGLPHRPRPLHGLQQPQPPALRQQEEQQQQQQLPRGEPPPGRLKSAPLFML 137

  Fly    70 EVYNEISED--------------------------QEPKEVLHQRHKRSL--------------- 93
            ::||.:|.|                          |.|....|..:::||               
Human   138 DLYNALSADNDEDGASEGERQQSWPHEAASSSQRRQPPPGAAHPLNRKSLLAPGSGSGGASPLTS 202

  Fly    94 -DDDILISNEDRQEIASCNSILTFSSRLKPEQLDNELDMHITFNTNDVPVDLSLVQAMLRIYKQP 157
             .|...:::.|.  :.|..:::.:.....|.|..::   ...||.:.:|....:..|..||||..
Human   203 AQDSAFLNDADM--VMSFVNLVEYDKEFSPRQRHHK---EFKFNLSQIPEGEVVTAAEFRIYKDC 262

  Fly   158 SLVD-RRANFTVSVYRKLDNRQ--DFSYRILGSVNTTSSQRGWLEFNLTDTLRYWL----HNKGL 215
            .:.. :...|.:|:|:.|...|  |....:|.:....:|:.|||||::|.|...|:    ||.||
Human   263 VMGSFKNQTFLISIYQVLQEHQHRDSDLFLLDTRVVWASEEGWLEFDITATSNLWVVTPQHNMGL 327

  Fly   216 QRRNELRISIGDS-QLSTFAAGLVTPQASRTSLEPFIVGYFNGPELLVK-IQKLRFKRDLEKRRA 278
            |    |.:...|. .:...|||||........ :||:|.:|...|:.|: .:....:|..:.|..
Human   328 Q----LSVVTRDGVHVHPRAAGLVGRDGPYDK-QPFMVAFFKVSEVHVRTTRSASSRRRQQSRNR 387

  Fly   279 GGGSPPPPPPPPVDLYRPPQ---SCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTK 340
            ...|...........|...:   :|.:....|.|::|...:|:||||.:.|.:|.|.|:|||...
Human   388 STQSQDVARVSSASDYNSSELKTACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAH 452

  Fly   341 MNATNHAIVQTLMHLKQP-HLPKPCCVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGCH 400
            ||||||||||||:||..| ::|||||.||.|.||::|.:.:...:.|.||:..|.:.||||
Human   453 MNATNHAIVQTLVHLMNPEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRACGCH 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 68/291 (23%)
TGFB 300..400 CDD:214556 48/100 (48%)
BMP6NP_001709.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..66
TGFb_propeptide 65..362 CDD:279078 70/298 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..131 8/41 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..200 6/54 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 373..398 3/24 (13%)
TGFB 412..513 CDD:214556 48/100 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.880

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