DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and bmp7.2

DIOPT Version :10

Sequence 1:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:XP_017947617.1 Gene:bmp7.2 / 619363 XenbaseID:XB-GENE-855954 Length:436 Species:Xenopus tropicalis


Alignment Length:431 Identity:128/431 - (29%)
Similarity:215/431 - (49%) Gaps:56/431 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LTSLFY----AASATTYVTTNNHI-----EMPIYQKRPLSEQMEMIDILDLGDRPRRQAEPNLHN 62
            |..|||    :.|:.|.:..:.|.     .:..:::|.:  |.|::.||.|..|||... |....
 Frog    25 LLFLFYISLSSISSNTILENDFHSSFVQRRLKGHERREI--QKEILTILGLQHRPRPYL-PEKKK 86

  Fly    63 SASKFLLEVYNEIS-EDQEPKEVLHQRHKRSLDD-DILISNEDRQEIASCNSILTFSSRLKPEQL 125
            ||..|::::||.:: ||...::|.:.....||:: ..|.::::...:|..:::::|::.:   :.
 Frog    87 SAPLFMMDLYNAVNIEDLNAEDVSYFNKPVSLNEHSSLATDQENDFLAHADTVMSFANLV---EN 148

  Fly   126 DNEL---DMHITFNTNDVPVDLSLVQAMLRIYKQPSLVDRRANFTVSVYRKLDNRQD---FSYRI 184
            ||||   .....|:..|:|:...|..|..||||  ..|:....:.|:||:.|..:.|   :.:::
 Frog   149 DNELYKNRQKFKFDLTDIPLGDELTAAEFRIYK--DYVENNETYQVTVYQVLQKQYDKEPYLFQV 211

  Fly   185 LGSVNTTSSQRGWLEFNLTDTLRYWL----HNKGLQRRNELRI------SIGDSQLSTFAAGLVT 239
             .|.....:::|||.|::|.|..:|:    :|.|||    |.|      |:....:..|  |...
 Frog   212 -DSRTIWGTEKGWLTFDITATSNHWVINPHYNLGLQ----LSIESMDMQSVNPRHVGLF--GRNG 269

  Fly   240 PQASRTSLEPFIVGYFNGPELLVKIQKLRFKRDLEKRRAGGGSPPP--PPPPPVDLYRP------ 296
            ||    ..:||:|.:|...|:.::..:....:...:.||.......  ||....|...|      
 Frog   270 PQ----DKQPFMVAFFKTSEIHLRSIRSTSNKHWNQERAKTYKEQDNFPPANISDGIMPTAKRRF 330

  Fly   297 -PQSCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLKQPH- 359
             .|:|::....|.|::|...:|:|||:.:.||:|.|.|.|||.:.||||||||||||:|...|. 
 Frog   331 FKQACKKHELFVSFRDLGWQDWIIAPEGYAAYYCDGECAFPLNSFMNATNHAIVQTLVHFVNPET 395

  Fly   360 LPKPCCVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGCH 400
            :|||||.||.|..|::|.:.:...:.|.||:..|.:.||||
 Frog   396 VPKPCCAPTQLNGISVLYFDDSSNVILKKYKNMVVQACGCH 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 63/232 (27%)
TGF_beta_BMP5_like 299..400 CDD:381639 46/101 (46%)
bmp7.2XP_017947617.1 TGFb_propeptide 44..280 CDD:459906 65/254 (26%)
TGF_beta_BMP7 330..436 CDD:381667 47/105 (45%)

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