DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and inha

DIOPT Version :10

Sequence 1:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001027522.1 Gene:inha / 613114 XenbaseID:XB-GENE-853910 Length:371 Species:Xenopus tropicalis


Alignment Length:140 Identity:31/140 - (22%)
Similarity:57/140 - (40%) Gaps:42/140 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 RRAGGGSPPPPPPPPVD-LYRPPQS------CERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGC 333
            ||:|    .|..|..:: |.|||:|      |.|.:..:.|:||....|::.|..|:.::|.|.|
 Frog   257 RRSG----VPWSPSALEFLQRPPESGAGSDHCHRGSLNITFEELGWGQWIVHPGSFQFHYCHGTC 317

  Fly   334 NFPLGTKMNATNHAIVQTLMHLKQPHLPKPCC--VPTVLGAITI-------LRYLNEDIIDLTKY 389
                     :..|.:...| |...      ||  :|:.:.::.:       ..|..|.:.::   
 Frog   318 ---------SPTHGLTPAL-HWGH------CCAALPSTMKSLRVTTTTDGGFSYRYETVPNI--- 363

  Fly   390 QKAVAKECGC 399
               :.::|.|
 Frog   364 ---LTQDCAC 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997
TGF_beta_BMP5_like 299..400 CDD:381639 22/116 (19%)
inhaNP_001027522.1 TGF_beta_INHA 283..371 CDD:381632 21/110 (19%)
Blue background indicates that the domain is not in the aligned region.

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