Protein Alignment scw and Gdf9

DIOPT Version :9

• Sequence 1: NP_001286088.1
• Gene: scw / 46000
• FlyBaseID: FBgn0005590
• Length: 400
• Species: Drosophila melanogaster
• Sequence 2: NP_067704.1
• Gene: Gdf9 / 59304
• RGDID: 71038
• Length: 440
• Species: Rattus norvegicus
• Alignment Length: 444
• Identity: 82/444 - (18%)
• Similarity: 152/444 - (34%)
• Gaps: 138/444 - (31%)

  Fly     4 VFFLTSLF--YAASATTYVTTNNHIEMPIYQKRPLSEQ-----------MEMIDILDLGDRPRRQ 55
            ::::..|:  ||........:.:|:...:....|.::|           :.|:|:|...||....
  Rat    86 LYYMKKLYKTYATKEGVPKPSRSHLYNTVRLFSPCAQQEQAPSNQMTGPLPMVDLLFNLDRVTAM 150

  Fly    56 AE-------PNLHNSASKFL-------LEVYNEISED----QEPKEVLHQRHKRSLDDDILISNE 102
            ..       ..|:|||:...       |.|...:|..    :.|.....::| |.::.|:
  Rat   151 EHLLKSVLLYTLNNSAASSSTVTCVCDLVVKEPMSSSKATPRAPYSFTLRKH-RWIEMDV----- 209

  Fly   103 DRQEIASCNSILTFSSRLKPEQLDNELDMHITFN---TNDVPVDLSLVQAMLRIYKQPSLVDRRA 164
                          :|.|:|....:|..:|::.|   |.|...:.......|.:  .|||:
  Rat   210 --------------TSLLQPLVASSERSIHLSVNFTCTRDQAPENGTFNMPLSV--PPSLI---- 254

  Fly   165 NFTVSVYRKLDNRQDFSYRILGSVNTTSSQ--RGWLEFNLTDTLRYWLHNKGLQRRNELRISIGD 227
                 :|                :|.||:|  ..|.  :|..|.|:..|.             |.
  Rat   255 -----LY----------------LNDTSTQAYHSWQ--SLQSTQRHSQHP-------------GQ 283

  Fly   228 SQLSTFAAGLVTPQASRTSLEPFIVGYFNGPELLVKIQKLRFKRDLEKRRAGGGSPPPPPPPPV- 291
            ..::|..   |..:|:.....|                         :.|.|..:.......|:
  Rat   284 DSVTTRP---VEEEATEVERSP-------------------------RHRRGQKTLSSETKKPLT 320

  Fly   292 ------DLYR----PPQSCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNH 346
                  :.:|    |...||..:|.:.|.:|...||::||.::...:|.|.|...:..:..:..|
  Rat   321 ASFNLSEYFRQFLFPQNECELHDFRLSFSQLKWDNWIVAPHRYNPRYCKGDCPRAVRHRYGSPVH 385

  Fly   347 AIVQTLMHLK-QPHLPKPCCVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGC 399
            .:||.:::.| .|.:|:|.|||.....:::|....:..|...:|:..:|..|.|
  Rat   386 TMVQNIIYEKLDPSVPRPSCVPGKYSPLSVLTIEPDGSIAYKEYEDMIATRCTC 439

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scw	NP_001286088.1	TGFb_propeptide	39..254	CDD:279078	44/248 (18%)
		TGFB	300..400	CDD:214556	28/101 (28%)
Gdf9	NP_067704.1	TGF_beta	337..439	CDD:278448	27/101 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3900
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810