DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and bmp10l

DIOPT Version :10

Sequence 1:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:XP_073770419.1 Gene:bmp10l / 571601 ZFINID:ZDB-GENE-130530-629 Length:406 Species:Danio rerio


Alignment Length:434 Identity:105/434 - (24%)
Similarity:183/434 - (42%) Gaps:116/434 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NHIEMPIYQKRPLSEQMEMIDILDLGDRPRRQAEPNLHNSASKFLLEVYNEISEDQEPKEVLHQR 88
            ::::|    ::.|.:.:.|:::.:.|.|.|.:      |.|.::::|:|.:.|.|          
Zfish    30 DNVDM----QQVLGQFLHMLNLTEQGPRSRAR------NEAPEYMMELYKKFSSD---------- 74

  Fly    89 HKRSLDDDILISNEDRQEIASCNSILTFSSRLKPEQLDNELDMHITFNTNDVPVDLSLVQAMLRI 153
              ||......|....|.:..|..|:|  ||.::.::|.        ||.: :|....:|.|.|||
Zfish    75 --RSAAPAANIIRSFRNQEHSSGSVL--SSGVRTQRLQ--------FNIS-IPQQEMVVSAELRI 126

  Fly   154 YKQPSLVDRRAN----FTVSVYRKLDNRQDFSYR-ILGSVNTTSSQRGWLEFNLTDTLRYWLHNK 213
            :   ..:.|:::    :||.::.  ..|.|..|| .|.|.:.......|..|::|:.:|.| ...
Zfish   127 H---MFLHRKSHTADAWTVRIFD--TQRSDTRYREPLASKHIHRKDISWEVFDMTNAIRNW-RKV 185

  Fly   214 GLQRRNELRISIGDSQLST---FAAGLVTPQASRTSLEPFIVGYFN------------------- 256
            |::..| |.:.|..:..:|   ...||...:......||.::.:.|                   
Zfish   186 GIETPN-LEVCIQKAFRNTNDWRYVGLDIDRDPDGKHEPVMIVFSNDQTEDQIGDGNKDQKETQM 249

  Fly   257 -----------GPELLV---------KIQK-------LRFKRDLEKRRAGGGSPPPPPPPPVDLY 294
                       .|:::.         |.||       :.::.....||:.               
Zfish   250 HSNIIHEDGGEDPQMISDERQWTDGNKDQKETQMQSNIIYEDGARVRRSA--------------- 299

  Fly   295 RPPQSCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLKQP- 358
             ..:.|......||||::...::::||..::|:.|.|.|::||..|:..|.|||||||::||.| 
Zfish   300 -KVEDCRIAEMYVDFKDIGWDSFILAPSGYQAFTCRGVCSYPLTQKVTPTKHAIVQTLLNLKSPQ 363

  Fly   359 HLPKPCCVPTVLGAITILRYLNED---IIDLTKYQKAVAKECGC 399
            ...:.|||||.|..|::| |.||:   ::| .||...|.|||||
Zfish   364 RAAQTCCVPTELKPISLL-YENENGVVVLD-NKYGGMVVKECGC 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 51/222 (23%)
TGF_beta_BMP5_like 299..400 CDD:381639 45/105 (43%)
bmp10lXP_073770419.1 None

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