DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and bmp7b

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001070614.2 Gene:bmp7b / 557567 ZFINID:ZDB-GENE-060929-328 Length:427 Species:Danio rerio


Alignment Length:423 Identity:127/423 - (30%)
Similarity:207/423 - (48%) Gaps:52/423 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AASATTYVTTNNHIEMPIYQKRPLSE-----QMEMIDILDLGDRPRRQAEPNL---HNSASKFLL 69
            |.:..|..|.:|.:......:|..|:     |.|::.||.|..|||    |:|   ||:|..|:|
Zfish    22 ADTVFTNFTLDNEVHSSFIHRRLKSQERREMQREILSILGLPHRPR----PHLHGKHNAAPMFML 82

  Fly    70 EVYNEISEDQEPKEVLHQRHK----------RSLDDDILISNEDRQEIASCNSILTFSSRLKPEQ 124
            ::||.:|.:.: :|.....:|          .:|.|:..:::.|.  :.|..:::.......|.:
Zfish    83 DLYNAMSTEGD-EEGFSYPYKPVFTTQGPPIATLQDNNFLNDADM--VMSFVNLVEHDKEFLPVR 144

  Fly   125 LDNELDMHITFNTNDVPVDLSLVQAMLRIYKQ--PSLVDRRANFTVSVYRKLDNR--QDFSYRIL 185
            ..:.   ...|:.:.:|...::..|..||||.  |...|.. .|.:|:|:.|:..  :|....:|
Zfish   145 RHHR---EFRFDLSKIPEGEAVTAAEFRIYKDFVPEHFDNE-TFRISIYQVLEEHLDRDSDLFLL 205

  Fly   186 GSVNTTSSQRGWLEFNLTDTLRYWLHNKGLQRRNELRISIGDSQ-LSTFAAGLV---TPQASRTS 246
            .|....:::.|||.|::|.|..:|:.|.|.....:|.:...|.| ::.:.||||   .||    |
Zfish   206 DSRVIWAAEEGWLVFDITVTSNHWVLNPGRNLGLQLALDSLDGQSVNPWVAGLVGRSGPQ----S 266

  Fly   247 LEPFIVGYFNGPELLVKIQKLRFKRDLEKRRAGGGSPPPPPPPPVDLYR--------PPQSCERL 303
            .:||:|.:|...|  |.|:.:|..:...|:|....|........:.:..        ..|:|::.
Zfish   267 KQPFMVAFFKATE--VHIRSIRSAQGGNKQRNPNRSKTAKGQEALRVANIAENSSADQKQACKKH 329

  Fly   304 NFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLKQPH-LPKPCCVP 367
            ...|.|::|...:|:|||:.:.||:|.|.|.|||.:.||||||||||||:|...|. :|||||.|
Zfish   330 ELYVSFRDLGWQDWIIAPEGYAAYYCMGECAFPLNSYMNATNHAIVQTLVHFINPETVPKPCCAP 394

  Fly   368 TVLGAITILRYLNEDIIDLTKYQKAVAKECGCH 400
            |.|.||::|.:.:...:.|.||:..|.:.||||
Zfish   395 TQLHAISVLYFDDSSNVILKKYRNMVVRACGCH 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 63/235 (27%)
TGFB 300..400 CDD:214556 47/100 (47%)
bmp7bNP_001070614.2 TGFb_propeptide 32..274 CDD:307025 66/256 (26%)
TGF_beta 326..426 CDD:306518 46/99 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.880

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