DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and inhbab

DIOPT Version :10

Sequence 1:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001018166.1 Gene:inhbab / 553816 ZFINID:ZDB-GENE-050525-2 Length:405 Species:Danio rerio


Alignment Length:330 Identity:80/330 - (24%)
Similarity:117/330 - (35%) Gaps:96/330 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 RLKPEQLDNELDMHITF-NTNDVP----VDLSLVQAMLRIYKQPSLVDRRANFTVSVYRKLDNRQ 178
            |.:||:...|:   ||| ...|.|    .|:|...:.|.:.:|       ||  |.::.|:..  
Zfish   122 REQPEEQPFEI---ITFAEPGDAPDVLKFDISKEGSTLSVVEQ-------AN--VWLFLKVAK-- 172

  Fly   179 DFSYRILGSVNTTSSQRGWLEFNLT-------------DTLRYWLHNKGLQRRNELRISIGDSQL 230
              ..|:.|.|:....|.|..:...|             ||.|...|...:.|..:..:. |||.|
Zfish   173 --GSRVKGKVSVQLLQNGKADSGSTDRPEDQVVSEKTIDTRRSGWHTLPVPRTVQTLLD-GDSSL 234

  Fly   231 STFAAGLVTPQASRTSLEPFIV----------GYFNGPELLVKI------QKLRFKRDLE---KR 276
            .:....  .|..:.....|.:|          ...:.|.|:|.:      |..|.||.||   |.
Zfish   235 LSLRVS--CPMCAEAGAVPILVPAEGNKVKEREQSHRPFLMVVLKPAEEHQHRRSKRGLECDGKI 297

  Fly   277 RAGGGSPPPPPPPPVDLYRPPQSCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGC-------- 333
            |.                     |.:..|.|:||::...:|:|||..:.|.:|.|.|        
Zfish   298 RV---------------------CCKRQFYVNFKDIGWSDWIIAPSGYHANYCEGDCPSHVASIT 341

  Fly   334 NFPLGTKMNATNHAIVQTLMHLKQPHLP----KPCCVPTVLGAITILRYLNEDIIDLTKYQKAVA 394
            ...|.......||       :..:.:.|    |.|||||.|.|:::|.|..|..|.....|..:.
Zfish   342 GSALSFHSTVINH-------YRMRGYSPFNNIKSCCVPTRLRAMSMLYYNEEQKIIKKDIQNMIV 399

  Fly   395 KECGC 399
            .||||
Zfish   400 DECGC 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 35/162 (22%)
TGF_beta_BMP5_like 299..400 CDD:381639 34/113 (30%)
inhbabNP_001018166.1 TGF_beta_INHBA 298..405 CDD:381674 35/135 (26%)

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