DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and bmp2

DIOPT Version :10

Sequence 1:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001015963.1 Gene:bmp2 / 548717 XenbaseID:XB-GENE-481829 Length:398 Species:Xenopus tropicalis


Alignment Length:407 Identity:95/407 - (23%)
Similarity:180/407 - (44%) Gaps:86/407 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PIYQKRPLSE-QMEMIDILDLGDRPRRQAEPNLHNSASKFLLEVYN----EISEDQEPKEVLHQR 88
            |.:.:..|:: ::.::::..|..||    .|..:.....::|::|:    :::.||:...:.:|.
 Frog    41 PQHSQSVLNQFELRLLNMFGLKRRP----TPGKNIVIPPYMLDLYHLHSGQLAADQDSSPMDYQI 101

  Fly    89 HKRSLDDDILISNEDRQEIASCNSILTFSSRLKPEQLDNELDMHIT---FNTNDVPVDLSLVQAM 150
            .:.:               :..|::.:|......|::....:..|.   ||.:.||.:..:..|.
 Frog   102 ERAA---------------SRANTVRSFHHEESMEEIPESGEKTIQRFFFNLSSVPNEELVTSAE 151

  Fly   151 LRIYK----QPSLVDRRANFTVSVY---------------RKLDNRQDFSYRILGSVNTTSSQRG 196
            |||::    :|...|......:::|               |.||.|         .::...|:  
 Frog   152 LRIFREGVQEPFEGDSSKLHRINIYDIVKPAAAASRGPVVRLLDTR---------LIHHNESK-- 205

  Fly   197 WLEFNLTDTLRYWLHNKGLQRRNELRISIGDSQLST------FAAGLVTPQASRTSLEPFIVGY- 254
            |..|::|..:..|:.:|.......:.::..|:..:.      .:..||..:.|...:.|.:|.: 
 Frog   206 WESFDVTPAITRWIAHKQPNHGFVVEVTHLDNDKNVPKKHVRISRSLVPDKDSWPRIRPLLVTFS 270

  Fly   255 FNGPELLVKIQKLRFKRDLEKRRAGGGSPPPPPPPPVDLYRPPQSCERLNFTVDFKELHMHNWVI 319
            .:|....:..::.|..|..:::|.                  ..||.|....|||.::..::|::
 Frog   271 HDGKGHALHKREKRQARHKQRKRL------------------KSSCRRHPLYVDFSDVGWNDWIV 317

  Fly   320 APKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLKQPHLPKPCCVPTVLGAITILRYL--NED 382
            ||..:.|::|.|.|.|||...:|:|||||||||::...|::||.|||||.|.||::| ||  ||.
 Frog   318 APPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNNVNPNIPKACCVPTELSAISML-YLDENEK 381

  Fly   383 IIDLTKYQKAVAKECGC 399
            :: |..||..|.:.|||
 Frog   382 VV-LKNYQDMVVEGCGC 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 40/246 (16%)
TGF_beta_BMP5_like 299..400 CDD:381639 49/103 (48%)
bmp2NP_001015963.1 TGFb_propeptide 37..269 CDD:459906 42/257 (16%)
TGF_beta_BMP2_like 298..398 CDD:381638 48/102 (47%)

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