DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and bmp2

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001015963.1 Gene:bmp2 / 548717 XenbaseID:XB-GENE-481829 Length:398 Species:Xenopus tropicalis


Alignment Length:407 Identity:95/407 - (23%)
Similarity:180/407 - (44%) Gaps:86/407 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PIYQKRPLSE-QMEMIDILDLGDRPRRQAEPNLHNSASKFLLEVYN----EISEDQEPKEVLHQR 88
            |.:.:..|:: ::.::::..|..||    .|..:.....::|::|:    :::.||:...:.:|.
 Frog    41 PQHSQSVLNQFELRLLNMFGLKRRP----TPGKNIVIPPYMLDLYHLHSGQLAADQDSSPMDYQI 101

  Fly    89 HKRSLDDDILISNEDRQEIASCNSILTFSSRLKPEQLDNELDMHIT---FNTNDVPVDLSLVQAM 150
            .:.:               :..|::.:|......|::....:..|.   ||.:.||.:..:..|.
 Frog   102 ERAA---------------SRANTVRSFHHEESMEEIPESGEKTIQRFFFNLSSVPNEELVTSAE 151

  Fly   151 LRIYK----QPSLVDRRANFTVSVY---------------RKLDNRQDFSYRILGSVNTTSSQRG 196
            |||::    :|...|......:::|               |.||.|         .::...|:  
 Frog   152 LRIFREGVQEPFEGDSSKLHRINIYDIVKPAAAASRGPVVRLLDTR---------LIHHNESK-- 205

  Fly   197 WLEFNLTDTLRYWLHNKGLQRRNELRISIGDSQLST------FAAGLVTPQASRTSLEPFIVGY- 254
            |..|::|..:..|:.:|.......:.::..|:..:.      .:..||..:.|...:.|.:|.: 
 Frog   206 WESFDVTPAITRWIAHKQPNHGFVVEVTHLDNDKNVPKKHVRISRSLVPDKDSWPRIRPLLVTFS 270

  Fly   255 FNGPELLVKIQKLRFKRDLEKRRAGGGSPPPPPPPPVDLYRPPQSCERLNFTVDFKELHMHNWVI 319
            .:|....:..::.|..|..:::|.                  ..||.|....|||.::..::|::
 Frog   271 HDGKGHALHKREKRQARHKQRKRL------------------KSSCRRHPLYVDFSDVGWNDWIV 317

  Fly   320 APKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLKQPHLPKPCCVPTVLGAITILRYL--NED 382
            ||..:.|::|.|.|.|||...:|:|||||||||::...|::||.|||||.|.||::| ||  ||.
 Frog   318 APPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNNVNPNIPKACCVPTELSAISML-YLDENEK 381

  Fly   383 IIDLTKYQKAVAKECGC 399
            :: |..||..|.:.|||
 Frog   382 VV-LKNYQDMVVEGCGC 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 40/246 (16%)
TGFB 300..400 CDD:214556 48/102 (47%)
bmp2NP_001015963.1 TGFb_propeptide 34..269 CDD:366248 42/257 (16%)
TGF_beta_BMP2_like 298..398 CDD:381638 48/102 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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