DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and bmp5

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_957345.1 Gene:bmp5 / 394026 ZFINID:ZDB-GENE-040426-1413 Length:446 Species:Danio rerio


Alignment Length:439 Identity:125/439 - (28%)
Similarity:208/439 - (47%) Gaps:76/439 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NNHIEMP-IYQKRPLSE----QMEMIDILDLGDRPRRQAEPNLHNSASKFLLEVYNEISEDQE-- 80
            :||:... ||::....|    |.|::.||.|..|||..:.....:||..|:|::||.::.::|  
Zfish    23 DNHVHSSFIYRRLRNHERREIQREILSILGLPHRPRPFSPGKQASSAPLFMLDLYNAMTTEEENA 87

  Fly    81 ------------------------PKEVLHQRHKR----SLDDDILISNEDRQEIASCNSILTFS 117
                                    |..|...:|.|    |.....|.:..|...:...:.:::|.
Zfish    88 ILGKSLAGKVRKSAPGAPHGYSRAPPRVPQPQHSRAAPLSSQSPPLANAHDTNFLNDADMVMSFV 152

  Fly   118 SRLKPEQLDNELDMH------ITFNTNDVPVDLSLVQAMLRIYKQPSLVDRRANFT--VSVY--- 171
            :.:   :.|.:...|      ..|:...:|...::..|..||||..|.: |..|.|  |::|   
Zfish   153 NLV---ERDKDFSHHRRHYREFRFDLTQIPEGEAVTAAEFRIYKDQSHI-RYENITLKVTIYQVI 213

  Fly   172 RKLDNRQDFSYRILGSVNTTSSQRGWLEFNLTDTLRYWL----HNKGLQRRNELRISIGDSQ-LS 231
            ::..||...:: :|......::..|||.|::|.|..:|:    .|.|||    |.:...|.: ::
Zfish   214 KEYPNRDPDTF-LLDWKKIRATDGGWLVFDITATSNHWVLNPQQNMGLQ----LCVETTDGRSIN 273

  Fly   232 TFAAGLV---TPQASRTSLEPFIVGYFNGPELLVK------IQKLRFKRDLEKRRAGGGSPPPPP 287
            ..:||::   .||    |.:||:|.:|...|:|::      .:|....|:..|.:.  .|.|...
Zfish   274 MKSAGIIGRNGPQ----SKQPFLVAFFKASEVLLRSVRATGSKKKSHNRNKSKTQV--KSTPALK 332

  Fly   288 PPPVDLYRPPQSCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHAIVQTL 352
            ....:.....|:|::....|.|::|...:|:|||:.:.|::|.|.|:|||...||||||||||||
Zfish   333 SGDQNTSEQRQACKKHELYVSFRDLGWQDWIIAPEGYAAFYCDGECSFPLNAHMNATNHAIVQTL 397

  Fly   353 MHLKQP-HLPKPCCVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGCH 400
            :||..| ::|||||.||.|.||::|.:.:...:.|.||:..|.:.||||
Zfish   398 VHLMFPDNVPKPCCAPTKLNAISVLYFDDSSNVILKKYRNMVVRSCGCH 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 62/263 (24%)
TGFB 300..400 CDD:214556 47/100 (47%)
bmp5NP_957345.1 TGFb_propeptide 23..295 CDD:279078 67/284 (24%)
TGF_beta 343..445 CDD:278448 47/101 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
77.020

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