DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and bmp15

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001018320.1 Gene:bmp15 / 334183 ZFINID:ZDB-GENE-030131-6115 Length:384 Species:Danio rerio


Alignment Length:461 Identity:96/461 - (20%)
Similarity:151/461 - (32%) Gaps:153/461 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLNVFFLTSLF-----------YAASATTYVTTNNHIEMPIYQKRPLSEQMEMIDILDLGDRPRR 54
            :|:..|:..:|           :...|:|.|..|.|                          |:|
Zfish    14 VLSCLFVLHIFTRVAGNMASPSHFGVASTEVHRNRH--------------------------PKR 52

  Fly    55 Q-------AEPNLHNSASKFLLEVYNEISE-DQEPKEVLHQRHKRSLDDDILISNEDRQEIASCN 111
            :       .|....:...:.:|.:|...:: |..||:     ||      |..||..|...||  
Zfish    53 RNPHFRPPVESRTDDDGMRLMLSLYRIAADADGRPKQ-----HK------IFGSNTIRLLQAS-- 104

  Fly   112 SILTFSSRLKPEQLDNELDMHITFNTNDVPVDLSLVQAMLRIYKQPSLVDRRANFTVSVYRKLDN 176
               |......|...|.:....:.:..||:.:| .||:|.....:.| :..|......:....|.|
Zfish   105 ---TTEKHFPPTSSDLQYTYTVKYELNDLLLD-KLVKASFMYLRSP-MSSRLPYICEASVTSLQN 164

  Fly   177 RQDFSYRILGSVNTTSSQRGWLEFNLTDTL------------RYWL----HNKGLQRRNELRISI 225
            ..:      |...|...:..|.|.::||.:            |||.    |.:.:..|...    
Zfish   165 PLE------GDRITMGPRSRWTETDVTDHVSESKDGHVSFFARYWCTKPEHKRSVAHRKRF---- 219

  Fly   226 GDSQLSTFAAGLVTPQASRTSLEPFIVGYFNGPELLVKIQKLRFKRDLEKRRAGGGSPPPPPPPP 290
                         .||           .:...|.||:.:::       .|.....|...||    
Zfish   220 -------------PPQ-----------HHLRAPLLLLFLEE-------NKHPVEWGKSFPP---- 249

  Fly   291 VDLYRP--------------------------PQSCERLNFTVDFKELHMHNWVIAPKKFEAYFC 329
              |.||                          ..:|:..:.:||||:|...:|||||.|:...:|
Zfish   250 --LSRPRTRRSKKSGSIVSDIPNFKQGLNRVTKNNCKLYSSSVDFKDLGWDHWVIAPHKYNPGYC 312

  Fly   330 GGGCNFPLGTKMNATNHAIVQT-LMHLKQPHLPKPCCVPTVLGAITILRYLNEDIIDLTKYQKAV 393
            .|.|...|....|:.||||:|| :..|....:|.|.|||.....:::|...:...||..:|:..:
Zfish   313 MGDCPRILHYGYNSPNHAIMQTFISELGVADIPLPSCVPYKYKRMSMLVMGSNGQIDYKEYEDMI 377

  Fly   394 AKECGC 399
            |..|.|
Zfish   378 ADSCTC 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 42/238 (18%)
TGFB 300..400 CDD:214556 36/101 (36%)
bmp15NP_001018320.1 TGF_beta 281..383 CDD:278448 35/101 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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