DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and Bmp5

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001101638.1 Gene:Bmp5 / 315824 RGDID:1305979 Length:454 Species:Rattus norvegicus


Alignment Length:434 Identity:129/434 - (29%)
Similarity:207/434 - (47%) Gaps:66/434 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NNHIEMP-IYQKRPLSE----QMEMIDILDLGDRPRRQAEPNLHNSASKFLLEVYNEISEDQEPK 82
            :||:... ||::....|    |.|::.||.|..|||..:.....:||..|:|::||.::.::.|:
  Rat    31 DNHVHSSFIYRRLRNHERREIQREILSILGLPHRPRPFSPGKQASSAPLFMLDLYNAMASEENPE 95

  Fly    83 E--------------------------VLHQRH-----KRSLDDDILISNEDRQEIASCNSILTF 116
            |                          ..|:.|     ..:.....|.|..|...:...:.:::|
  Rat    96 ESEYLVRVSLAGEAKETRKGYPASPNGYAHRLHLPPRIPLTTQSPPLASLHDTNFLNDADMVMSF 160

  Fly   117 SSRLKPEQLDNELDMH---ITFNTNDVPVDLSLVQAMLRIYKQPSLVDRRANFT--VSVY---RK 173
            .:.::.::..:....|   ..|:...:|...::..|..||||..| ..|..|.|  :|:|   ::
  Rat   161 VNLVERDKDFSHQRRHYKEFRFDLTQIPHGEAVTAAEFRIYKDKS-NHRFENETIKISIYQIIKE 224

  Fly   174 LDNRQDFSYRILGSVNTTSSQRGWLEFNLTDTLRYWL----HNKGLQRRNELRISIGDSQ-LSTF 233
            ..|| |....:|.:....:...|||.|::|.|..:|:    :|.|||    |....||.: ::..
  Rat   225 YTNR-DADLFLLDTRKAQALDVGWLVFDITVTSNHWVINPQNNLGLQ----LCAETGDGRSINVK 284

  Fly   234 AAGLV---TPQASRTSLEPFIVGYFNGPELLVKIQKLRFKRDLEKRRAGGGSPPPPPPPPVDLY- 294
            :||||   .||    |.:||:|.:|...|:|::..:...||..:.|........|...|....| 
  Rat   285 SAGLVGRHGPQ----SKQPFMVAFFKASEVLLRSVRAASKRKNQNRNKSSSHQDPSRIPSAGDYN 345

  Fly   295 --RPPQSCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLKQ 357
              ...|:|::....|.|::|...:|:|||:.:.|::|.|.|:|||...||||||||||||:||..
  Rat   346 TSEQKQACKKHELYVSFRDLGWQDWIIAPEGYAAFYCDGECSFPLNAHMNATNHAIVQTLVHLMF 410

  Fly   358 P-HLPKPCCVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGCH 400
            | |:|||||.||.|.||::|.:.:...:.|.||:..|.:.||||
  Rat   411 PDHVPKPCCAPTKLNAISVLYFDDSSNVILKKYRNMVVRSCGCH 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 64/261 (25%)
TGFB 300..400 CDD:214556 48/100 (48%)
Bmp5NP_001101638.1 TGFb_propeptide 31..304 CDD:279078 69/282 (24%)
TGFB 353..454 CDD:214556 48/100 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.020

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