Protein Alignment scw and Gdf1

DIOPT Version :9

• Sequence 1: NP_001286088.1
• Gene: scw / 46000
• FlyBaseID: FBgn0005590
• Length: 400
• Species: Drosophila melanogaster
• Sequence 2: NP_001037705.1
• Gene: Gdf1 / 306351
• RGDID: 1304678
• Length: 357
• Species: Rattus norvegicus
• Alignment Length: 138
• Identity: 49/138 - (35%)
• Similarity: 64/138 - (46%)
• Gaps: 21/138 - (15%)

  Fly   268 RFKRDLEKRRAGGGSPPPPPPPPVDLYRPPQSCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGG 332
            |.:|..|.|..||               |..:|......|.|:|:..|.|||||:.|.|.||.|.
  Rat   234 RSRRHTEPRVGGG---------------PVGTCRTRRLHVSFREVGWHRWVIAPRGFLANFCQGT 283

  Fly   333 CNFPLGTK----MNATNHAIVQTLMH--LKQPHLPKPCCVPTVLGAITILRYLNEDIIDLTKYQK 391
            |..|...:    ..|.|||:::.|||  ...|.:..|||||..|..|::|.:.|.|.:.|..|:.
  Rat   284 CALPETLRGPGGPPALNHAVLRALMHAAAPTPGVGSPCCVPERLSPISVLFFDNSDNVVLRHYED 348

  Fly   392 AVAKECGC 399
            .|..||||
  Rat   349 MVVDECGC 356

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scw	NP_001286088.1	TGFb_propeptide	39..254	CDD:279078
		TGFB	300..400	CDD:214556	42/106 (40%)
Gdf1	NP_001037705.1	TGFB	251..357	CDD:214556	42/106 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3900
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810