DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and bmp7a

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_571396.1 Gene:bmp7a / 30584 ZFINID:ZDB-GENE-000208-25 Length:432 Species:Danio rerio


Alignment Length:444 Identity:127/444 - (28%)
Similarity:213/444 - (47%) Gaps:60/444 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLNVFFLTSLFYAASATTYV-------TTNNHIEMPIYQKRPLSE-----QMEMIDILDLGDRPR 53
            |..|..:::|..|...:...       |.:|.|:....|:|..|:     |.|::.||.|..|||
Zfish     5 MFPVHLISTLIVACGCSVLADAMQANFTMDNDIQSSFIQRRLKSQERREMQREILSILGLPQRPR 69

  Fly    54 RQAEPNL---HNSASKFLLEVYNEISEDQEPKEVLHQRHK--RSLDDDILISNEDRQEIASCNSI 113
                |.|   |.:|..::|::||.|.||.:.:..|...::  .:.....|::.:|.:.::..:.:
Zfish    70 ----PLLHERHTAAPMYMLDLYNAILEDGDRRGGLVYSYEPAYTTPGPPLVTQQDSRFLSDADMV 130

  Fly   114 LTFSSRLKPE---QLDNELDMHITFNTNDVPVDLSLVQAMLRIYKQPSLVDRRAN--FTVSVYRK 173
            ::|::.:.||   ||.::......|:.:.:|...::..|..||||. .:.:|..|  |.|||::.
Zfish   131 MSFANTVDPEEDLQLYHQHRREFRFDLSRIPPGETVTAAEFRIYKD-FVRERYENETFHVSVFQV 194

  Fly   174 LDNRQDFSYRILGSVNTTSSQRGWLEFNLTDTLRYWLHNKGLQRRNELRISIG-DSQLSTFAAGL 237
            |..:......:|.|....:::.|||.|:||.|..:|:.|.|.....:|.:... .::::...|||
Zfish   195 LQQQHRRELYLLDSRVVWAAEEGWLVFDLTVTSNHWVINPGQNLGLQLLVETSHGARMNPRRAGL 259

  Fly   238 VTPQASRTSLEPFIVGYFNGPELLVKIQKLRFKRDLEKRRAGGG----------SPPPPPPPPVD 292
            |....::.. :||:|.:.....:.::          ..|.|.||          :.|......|.
Zfish   260 VGSSGAQNK-QPFMVAFLKASGIHLR----------SVRSASGGKQKGHHRTKNAKPGAAHSQVA 313

  Fly   293 L----------YRPPQSCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHA 347
            |          ..|.|.|::....|.|::|...:|:|||:.:.||:|.|.|.|||.:.|||||||
Zfish   314 LKTAEATEGASIDPKQGCKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECVFPLNSYMNATNHA 378

  Fly   348 IVQTLMHLKQPH-LPKPCCVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGCH 400
            |||||:|...|. :|||||.||.|..|::|.:.:...:.|.||:..|.:.||||
Zfish   379 IVQTLVHFINPETVPKPCCAPTQLHGISVLYFDDSSNVILKKYRNMVVRACGCH 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 60/225 (27%)
TGFB 300..400 CDD:214556 46/100 (46%)
bmp7aNP_571396.1 TGFb_propeptide 34..275 CDD:279078 65/246 (26%)
TGF_beta 329..431 CDD:278448 46/101 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.880

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