DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and inhbb

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_571143.2 Gene:inhbb / 30275 ZFINID:ZDB-GENE-990415-2 Length:393 Species:Danio rerio


Alignment Length:361 Identity:85/361 - (23%)
Similarity:133/361 - (36%) Gaps:96/361 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PNLHNSASKFLLEVYNEISEDQEPKEVLHQRHKRSLDDDI---------LISNEDRQEIASCNSI 113
            |||...|:      :||:.|  |..|::    ..:..||:         |||||..|.:....:.
Zfish   109 PNLDGHAA------HNEVQE--ETSEII----SFAESDDVTPSKSSLYFLISNEGNQNLYVLQAN 161

  Fly   114 LTFSSRLKPEQLDNELDMHITFNTNDVPVDLSLVQAMLRIYKQPSLVDRRANFTVSVYRKLDNRQ 178
            |....:|.|..|:..|                                 |...||.|:......|
Zfish   162 LWLYFKLMPGTLEKGL---------------------------------RRKVTVRVHSYEPGGQ 193

  Fly   179 DFSYRILGSVNTTSSQRGWLEFNLTDTLRYWLHNKGLQRRNELRISIGDSQLSTFAAGLVTPQAS 243
            :..:.:: .......:.||..|.:::.:|..|...|  ||.:|.|.....:.:.....||.|  |
Zfish   194 NVHWPMM-EKRVELKRSGWHTFPVSEAIREMLAKGG--RRQDLDIHCEGCEAANVLPILVDP--S 253

  Fly   244 RTSLEPFIVGYFNGPELLVKIQ------KLRFKRDLEKRRAGGGSPPPPPPPPVDLYRPPQSCER 302
            ..|..||:|         |:.|      ::| ||.||.....||                 .|.|
Zfish   254 DPSHRPFLV---------V
RAQQADGKHRIR-KRGLECDGNNGG-----------------LCCR 291

  Fly   303 LNFTVDFKELHMHNWVIAPKKFEAYFCGGGC-NFPLGTKMNATN-HAIV--QTLMHLKQPHLPKP 363
            ..|.:||:.:..::|:|||..:...:|.|.| .:..|...:|:: |..|  |..|....|.....
Zfish   292 QQFYIDFRLIGWNDWIIAPAGYYGNYCEGSCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSVNS 356

  Fly   364 CCVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGC 399
            ||:||.|..:::|.:.:|..|........:.:||||
Zfish   357 CCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVEECGC 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 45/204 (22%)
TGFB 300..400 CDD:214556 31/104 (30%)
inhbbNP_571143.2 TGFb_propeptide 54..263 CDD:279078 45/212 (21%)
TGFB 289..392 CDD:214556 29/102 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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