DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and inhbaa

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001349183.1 Gene:inhbaa / 30072 ZFINID:ZDB-GENE-000210-21 Length:395 Species:Danio rerio


Alignment Length:381 Identity:91/381 - (23%)
Similarity:160/381 - (41%) Gaps:82/381 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 MIDILDLGDRPRRQAEPNL-HNSASKFLLEVYNEISEDQEPKEVLHQRHKRSLDDDILI----SN 101
            ::::|.|.:|      ||: |......||....::...:..|           |..:||    ||
Zfish    73 ILNMLHLQER------PNITHPVPRAALLNAIRKVHVGRVAK-----------DGSVLIEDEASN 120

  Fly   102 EDRQEIASCNSILTFSSRLKPEQLDNEL------DMHITFNTNDVPVDLSLVQAMLRIYKQPSLV 160
            ....|.|....|:||:...:...:.|.|      :|.:        ||.:.|...||:   |...
Zfish   121 RAETEQAEQTEIITFAETGEAPGIVNFLISKEGGEMSV--------VDQANVWIFLRL---PKGN 174

  Fly   161 DRRANFTVSVYRKLDNRQDFSYRILGSVNTTSSQRGWLEFNLTDTLRYWLHNKGLQRRNELRIS- 224
            ..|||..:    :|..:|....:||...:..:.:.||..|..:::::..|...|  ....||:| 
Zfish   175 RTRANVNI----RLLLQQGAGEKILAEKSVDTRRSGWHTFPASESVQSLLQRGG--STLSLRVSC 233

  Fly   225 --IGDSQLSTFAAGLVTPQAS--RTSLEPFIVGYFNGPELLVKIQKLRFKRDLEKRRAGGGSPPP 285
              ..|::.:..   ||:|..|  ..|..||::.      ::.::.:|..:|   :|:.|      
Zfish   234 PLCADARATPV---LVSPGGSEREQSHRPFLMA------VVRQMDELSLRR---RRKRG------ 280

  Fly   286 PPPPPVDLYRPPQSCERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGC--NFPLGTKMNATNHAI 348
                 ::.....:.|.:..|.|:||::..::|:|||..:.|.:|.|.|  |....|..:.:.|:.
Zfish   281 -----LECDGKARVCCKRQFYVNFKDIGWNDWIIAPSGYHANYCEGDCASNVASITGNSLSFHST 340

  Fly   349 VQTLMHLK-QPHLP----KPCCVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGC 399
            |  :.|.: :.:.|    |.|||||.|.|:::|.|..|..|.....|..:.:||||
Zfish   341 V--ISHYRIRGYSPFTNIKSCCVPTRLRAMSMLYYNEEQKIVKKDIQNMIVEECGC 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078 51/227 (22%)
TGFB 300..400 CDD:214556 36/107 (34%)
inhbaaNP_001349183.1 TGFb_propeptide 67..263 CDD:307025 51/226 (23%)
TGF_beta 290..394 CDD:306518 34/105 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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