DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and Inhbb

DIOPT Version :10

Sequence 1:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_542949.1 Gene:Inhbb / 25196 RGDID:2913 Length:411 Species:Rattus norvegicus


Alignment Length:414 Identity:92/414 - (22%)
Similarity:159/414 - (38%) Gaps:116/414 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KRPLSEQMEMIDILDLGD-----------RPRRQAEPNLHNSASKFLLEVYNEISEDQEPKEVLH 86
            :||  |::..:|    ||           |.:.:..||:.::..|..:..            .|.
  Rat    66 RRP--EELGRVD----GDFLEAVKRHILSRLQLRGRPNITHAVPKAAMVT------------ALR 112

  Fly    87 QRHKRSLDDDILIS----------NEDRQEIASCNSILTF-------SSRLKPEQLDNELDMHIT 134
            :.|...:.:|..:.          ..|.||..|  .|::|       |||::         ::. 
  Rat   113 KLHAGKVREDGRVEIPHLDGHASPGADGQERVS--EIISFAETDGLASSRVR---------LYF- 165

  Fly   135 FNTNDVPVDLSLVQAMLRIYKQ--PSLVDR--RANFTVSVYRKLDNRQDFSYRILGSVNTTSSQR 195
            |.:|:...:|.:|||.|.:|.:  |.::::  |....|.||.:.....|....:...|:...|  
  Rat   166 FVSNEGNQNLFVVQASLWLYLKLLPYVLEKGSRRKVRVKVYFQEQGHGDRWNVVEKKVDLKRS-- 228

  Fly   196 GWLEFNLTDTLRYWLHNKGLQRRNELRISIGDSQLSTFAAGLVTP---QASRTSLEPFIVGYFNG 257
            ||..|.:|:.:      :.|..|.|.|::: |.|..:.....|.|   .....|..||:|     
  Rat   229 GWHTFPITEAI------QALFERGERRLNL-DVQCDSCQELAVVPVFVDPGEESHRPFVV----- 281

  Fly   258 PELLVKIQ--------KLRFKRDLEKRRAGGGSPPPPPPPPVDLYRPPQSCERLNFTVDFKELHM 314
                  :|        ::| ||.||   ..|.:               ..|.|..|.:||:.:..
  Rat   282 ------VQARLGDSRHRIR-KRGLE---CDGRT---------------SLCCRQQFFIDFRLIGW 321

  Fly   315 HNWVIAPKKFEAYFCGGGC-NFPLGTKMNATN-HAIV--QTLMHLKQPHLPKPCCVPTVLGAITI 375
            ::|:|||..:...:|.|.| .:..|...:|:: |..|  |..|....|.....||:||.|.::::
  Rat   322 NDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGPVNSCCIPTKLSSMSM 386

  Fly   376 LRYLNEDIIDLTKYQKAVAKECGC 399
            |.:.:|..|........:.:||||
  Rat   387 LYFDDEYNIVKRDVPNMIVEECGC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 51/249 (20%)
TGF_beta_BMP5_like 299..400 CDD:381639 31/105 (30%)
InhbbNP_542949.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..69 2/4 (50%)
TGFb_propeptide 73..282 CDD:480997 51/256 (20%)
TGF_beta_INHBB 305..411 CDD:381675 31/106 (29%)

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