DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and Gdf7

DIOPT Version :9

Sequence 1:NP_001286088.1 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001299805.1 Gene:Gdf7 / 238057 MGIID:95690 Length:461 Species:Mus musculus


Alignment Length:101 Identity:44/101 - (43%)
Similarity:60/101 - (59%) Gaps:1/101 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 CERLNFTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLKQPH-LPKP 363
            |.|.:..||||||...:|:|||..:|||.|.|.|:|||.:.:..|||||:|||::...|. .|..
Mouse   360 CSRKSLHVDFKELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLLNSMAPDAAPAS 424

  Fly   364 CCVPTVLGAITILRYLNEDIIDLTKYQKAVAKECGC 399
            ||||..|..|:||.....:.:...:|:..|.:.|||
Mouse   425 CCVPARLSPISILYIDAANNVVYKQYEDMVVEACGC 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_001286088.1 TGFb_propeptide 39..254 CDD:279078
TGFB 300..400 CDD:214556 44/101 (44%)
Gdf7NP_001299805.1 TGFb_propeptide <87..232 CDD:279078
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..360 44/101 (44%)
TGFB 363..461 CDD:214556 42/98 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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