DRSC/TRiP Functional Genomics Resources

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Protein Alignment scw and Bmp4

DIOPT Version :10

Sequence 1:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_031580.2 Gene:Bmp4 / 12159 MGIID:88180 Length:408 Species:Mus musculus


Alignment Length:398 Identity:99/398 - (24%)
Similarity:163/398 - (40%) Gaps:109/398 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RRQAEPNLHNSASKFLLEVYNEISEDQEPKEVLHQRHKRSLDDDILISNEDRQEIASCNSILTFS 117
            ||:.:|:.......::.::|...|.::|.:|   |.....|:       ...:..:..|::.:|.
Mouse    68 RRRPQPSKSAVIPDYMRDLYRLQSGEEEEEE---QSQGTGLE-------YPERPASRANTVRSFH 122

  Fly   118 SRLKPEQLDN------ELDMHITFNTNDVPVDLSLVQAMLRIYKQPSLVDRRANF-----TVSVY 171
            ..   |.|:|      .......||.:.:|.:..:..|.||::::.  ||:..::     .:::|
Mouse   123 HE---EHLENIPGTSESSAFRFLFNLSSIPENEVISSAELRLFREQ--VDQGPDWEQGFHRINIY 182

  Fly   172 ----------------RKLDNRQDFSYRILGSVNTTSSQRGWLEFNLTDTLRYW----------- 209
                            |.||.|       |...|.|.    |..|:::..:..|           
Mouse   183 EVMKPPAEMVPGHLITRLLDTR-------LVHHNVTR----WETFDVSPAVLRWTREKQPNYGLA 236

  Fly   210 -----LHNKGLQRRNELRISIGDSQLSTFAAGLVTPQASR--TSLEPFIVGYFNGPELLVKIQKL 267
                 ||.....:...:|||..            .||.|.  ..|.|.:|               
Mouse   237 IEVTHLHQTRTHQGQHVRISRS------------LPQGSGDWAQLRPLLV--------------- 274

  Fly   268 RFKRD-----LEKRRAGGGSPPPPPPPPVDLYRPPQSCERLNFTVDFKELHMHNWVIAPKKFEAY 327
            .|..|     |.:|||    ...|...|....:..::|.|.:..|||.::..::|::||..::|:
Mouse   275 TFGHDGRGHTLTRRRA----KRSPKHHPQRSRKKNKNCRRHSLYVDFSDVGWNDWIVAPPGYQAF 335

  Fly   328 FCGGGCNFPLGTKMNATNHAIVQTLMHLKQPHLPKPCCVPTVLGAITILRYLNE-DIIDLTKYQK 391
            :|.|.|.|||...:|:|||||||||::.....:||.|||||.|.||::| ||:| |.:.|..||:
Mouse   336 YCHGDCPFPLADHLNSTNHAIVQTLVNSVNSSIPKACCVPTELSAISML-YLDEYDKVVLKNYQE 399

  Fly   392 AVAKECGC 399
            .|.:.|||
Mouse   400 MVVEGCGC 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 44/245 (18%)
TGF_beta_BMP5_like 299..400 CDD:381639 47/102 (46%)
Bmp4NP_031580.2 TGFb_propeptide 43..276 CDD:459906 44/260 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..111 5/29 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..307 6/29 (21%)
TGF_beta_BMP4_BMP2B 302..408 CDD:381661 47/107 (44%)

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