DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scw and Bmp2

DIOPT Version :10

Sequence 1:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_031579.2 Gene:Bmp2 / 12156 MGIID:88177 Length:394 Species:Mus musculus


Alignment Length:421 Identity:115/421 - (27%)
Similarity:170/421 - (40%) Gaps:121/421 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RPLSEQMEMIDILDLGDRPRRQAEPNLHNSASKFLLEVYNEISEDQEP---KEV--------LHQ 87
            ||||...|  |:|                  |:|.|.:.:.....|.|   |:|        |::
Mouse    39 RPLSRPSE--DVL------------------SEFELRLLSMFGLKQRPTPSKDVVVPPYMLDLYR 83

  Fly    88 RHKRSLDDDILISNEDRQEIAS--CNSILTFSSRLKPEQL---DNELDMHITFNTNDVPVDLSLV 147
            ||.......   :.:.|.|.|:  .|::.:|......|:|   ..:......||.:.||.|..|.
Mouse    84 RHSGQPGAP---APDHRLERAASRANTVRSFHHEEAVEELPEMSGKTARRFFFNLSSVPSDEFLT 145

  Fly   148 QAMLRIYKQP-------SLVDRR-----------ANFTVSVYRKLDNRQDFSYRILGSVNTTSSQ 194
            .|.|:|:::.       |....|           ||....|.|.||.|         .||..:||
Mouse   146 SAELQIFREQIQEALGNSSFQHRINIYEIIKPAAANLKFPVTRLLDTR---------LVNQNTSQ 201

  Fly   195 RGWLEFNLTDTLRYWL-----------------HNKGLQRRNELRISIGDSQLSTFAAGLVTPQA 242
              |..|::|..:..|.                 .|.|:.:|: :|||          ..|...:.
Mouse   202 --WESFDVTPAVMRWTTQGHTNHGFVVEVAHLEENPGVSKRH-VRIS----------RSLHQDEH 253

  Fly   243 SRTSLEPFIV--GYFNGPELLVKIQKLRFKRDLEKRRAGGGSPPPPPPPPVDLYRPPQSCERLNF 305
            |.:.:.|.:|  |:......|.|.:|.:.|....||.                   ..||:|...
Mouse   254 SWSQIRPLLVTFGHDGKGHPLHKREKRQAKHKQRKRL-------------------KSSCKRHPL 299

  Fly   306 TVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLKQPHLPKPCCVPTVL 370
            .|||.::..::|::||..:.|::|.|.|.|||...:|:|||||||||::.....:||.|||||.|
Mouse   300 YVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVNSKIPKACCVPTEL 364

  Fly   371 GAITILRYL--NEDIIDLTKYQKAVAKECGC 399
            .||::| ||  ||.:: |..||..|.:.|||
Mouse   365 SAISML-YLDENEKVV-LKNYQDMVVEGCGC 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 56/267 (21%)
TGF_beta_BMP5_like 299..400 CDD:381639 48/103 (47%)
Bmp2NP_031579.2 TGFb_propeptide 45..265 CDD:459906 56/264 (21%)
TGF_beta_BMP2 292..394 CDD:381660 48/104 (46%)

Return to query results.
Submit another query.