DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)M3 and fs(1)N

DIOPT Version :10

Sequence 1:NP_572284.4 Gene:fs(1)M3 / 45994 FlyBaseID:FBgn0005390 Length:1836 Species:Drosophila melanogaster
Sequence 2:NP_569901.1 Gene:fs(1)N / 45973 FlyBaseID:FBgn0004650 Length:2118 Species:Drosophila melanogaster


Alignment Length:2093 Identity:414/2093 - (19%)
Similarity:692/2093 - (33%) Gaps:685/2093 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VQSELSAAEVAGDPS----------------------AAQLLPSSCRNGLNGSSSGPEIRLPFVD 65
            ::.:::|.||||..:                      ..||:|.:    :.|.:.|      |||
  Fly   358 LRQQVAAPEVAGVTAFQMGGRSYLALGGIMPQILVYVQGQLVPRT----ILGQNFG------FVD 412

  Fly    66 MMVRHEKPLFVLREPEEDLLLLLHGHEIFQLH--------VATGE-------------------- 102
                |..|:.| |...:|||||:....:|..|        |..||                    
  Fly   413 ----HYLPIPV-RSYRDDLLLLVQHRVVFDTHSLLVLEVLVWNGEAFEAGLPPPCGTAYGAGCML 472

  Fly   103 ---------------------------RRLVPLG--YLAGQVSGRRALGAEVVAWREFLLLAIVL 138
                                       |:..|.|  .|..|:..|.:...:::..|:|  :...:
  Fly   473 DQDREAGISGAVLLRRSTNQPPLVVVPRKEAPTGIFVLETQLLARNSETQDLLEIRQF--MQDWV 535

  Fly   139 DDSMEVYQLPKELLLSEDPATQVSFEPLQEFSLP------GAFLQLHL--LKPSG---------- 185
            .:..|:.||.:|||     |.:...:.::|.|.|      |...:|.:  .:.:|          
  Fly   536 HEQEELIQLAEELL-----AEKSESQYIEELSTPLVVSEGGTVEELFVNEARWTGADAVVDVSSL 595

  Fly   186 -DQVLLLVASNHTRSHSKCRTFEWLDTYFNPLEEITLPAIRV-LQVVGRQPLYIIFGRSLKGSQS 248
             .|:|||.....:| .||.:.....:.::..||...:.::.: |:.:..:..||..|        
  Fly   596 LQQILLLDGEMSSR-RSKRQPETLFNFHYEQLEVEAVDSVELNLEKLNHETFYIRNG-------- 651

  Fly   249 KLVLTIYELDRNSRILQQRQALTVQAQSVQAVRFHGRNCLIACTSSASASCIFFRMVDG----QF 309
                   .||.:...|..:|...::|..::.|..||.........:.....||...::.    |.
  Fly   652 -------SLDLHLGTLNVQQLELLEAPKLELVPVHGAESYKILKMATDLDSIFINEMEWDKLLQD 709

  Fly   310 VVYRKHARKDLSFRRLSATKKGHLLIGARANGEVIVFSSTRLDCYSGFQVAGEADPSGLLIHKNL 374
            :|:|....|               |......|.||......|...:.....|:            
  Fly   710 LVWRHQPLK---------------LSQLHVEGPVIFEDVLSLHSLNDLSFPGD------------ 747

  Fly   375 HNETFLLLAYRRSSSDLIRTVQLGGVEEISNQVGAAPDEDLSVVQLHRHEFEESINALRGLLLRR 439
                     |..|..:....||             ||.|....:..:..:...:|||:....:..
  Fly   748 ---------YLWSQGNETSVVQ-------------APKEFTQTLSANAVDTTGTINAVYPHDVIT 790

  Fly   440 RSSTENLRNIVDILKRKSAIHLDTPLHLVQQGQIGRLQLVDEHLRTPTQLKQRLEELRQRFKAIQ 504
            .|.::....:|      :..||:....|...|.....|..:..| .||.|:.|:......|:.:.
  Fly   791 LSDSQEWPGLV------TFSHLEVSEELELNGSAQGRQFEEAPL-NPTLLESRVISADCHFEQLL 848

  Fly   505 TRRTTRSFGTGNENDEPETLKARRLRVGNLIYKGQLISGHILDNSKPPMLTIRNSPLQTKKL--- 566
            .|...|..|. .:||.          .|:|:  |.|               ::.||...::|   
  Fly   849 VRGPLRLLGK-VDNDS----------FGSLL--GDL---------------VQRSPNSAQELQIS 885

  Fly   567 ---RVNQLVTPQDFRNSSGAQIAPEETSG---SECVVRHL-----RVEQINGVQWNDFLDSLFLR 620
               ||:||:.|.|      |.||..:.||   ::.|.:|.     .:.|:.|..:...|:    .
  Fly   886 GQKRVDQLLLPVD------AHIADNQLSGIFLNDFVTKHTPQTLSNLSQLGGYVYFHQLE----L 940

  Fly   621 SRDTSIEG-RL--VMQSRVRVNS---LKTPLLNGLVVDRLFNLRRAQVIS--SNIYMSAFFAPRL 677
            .:::|.:| ||  ::...:|::|   |.:|......|....|..|.||.:  :.:.:|       
  Fly   941 GKESSYDGVRLEELLSKSLRLDSPFPLSSPHTRLRFVGHAPNFTRLQVENTLNKVPLS------- 998

  Fly   678 EAQQVNGLDFAHDVLH--RGSNDTWIKTPVRINQMSVSGDIFVGNTSK---WQPQPR-------- 729
                 :|....|:.||  |.:....:....::| ..|||:..:...|.   .|.|||        
  Fly   999 -----SGYQLLHEPLHLGRANFSRLMAGQAQVN-YDVSGNGLLNGRSLIRILQEQPRTWSGEVHV 1057

  Fly   730 ---------------------------QLDD-P---MEQRLQQYYTGRVTIRGSLTVTNVL---- 759
                                       |||: |   ::.|:|   ..|:.:.||:.....|    
  Fly  1058 QELILPQGVQANQLQGIKADLLLDFLQQLDELPLLILQGRIQ---VERIAVNGSVQAAETLNMQP 1119

  Fly   760 -RDTANSLIVLGNQSLARKDIQSTYLLDQTPQNLTNLTFGHARVSVPSMTTSYVDGHPVRDHLLS 823
             .:....::.|..|:    ::.:.::|.::||...||                            
  Fly  1120 FHELQRQVVWLDRQN----ELGTRWVLKESPQFQQNL---------------------------- 1152

  Fly   824 GGQQNQHTHPNNTLHIIFMNATILGDVICRDYSSR-LAEIAKDAVSHGDA--VNITGHKHFQAPL 885
                                 .:||     .::.| |.|:..|.|...||  |.|.|.|.|.||:
  Fly  1153 ---------------------QVLG-----SFNERLLPELLDDIVLRSDAHEVLIEGTKSFLAPV 1191

  Fly   886 TVQALQANEINGVPVSEIVVKSNTTQNFTGTKTFARVVVANDINVHDHLNVSHLNGLP-----LQ 945
            ..:.|....:||:|.:.:..|.:.. :.||.......:...|:.::     ..:||.|     ||
  Fly  1192 NTKELHLAALNGIPFNHMANKLSPL-HLTGNVRIQGRIFVEDLQLN-----GQVNGDPDIPADLQ 1250

  Fly   946 QLLGHD-----------ISLQRLELTETPHLENL----HFRRLNGLPFDELLSKISEDGEQPLLL 995
            :||..|           :.|.:.|      ||.|    |.:..:..|..||..::....::.:.|
  Fly  1251 KLLRWDPNAGGFVHRGVVELPKKE------LERLVVLGHLKNRSREPVQELFDQLVFKQQRGIHL 1309

  Fly   996 HKQLLIEGNVRFDKAVQVQNINGIQWDEYLDRLVRSDSNAEIRGKK--TFMADVQIND------A 1052
            |......|.:|.:....::..||...:::|:.|:..||..|||.:.  .|.|||:::.      .
  Fly  1310 HGHKTFTGRLRIEDGAHIKFFNGRNLEQFLENLIYVDSQGEIRLETPVRFAADVKMDHLEADRLV 1374

  Fly  1053 LQSPHINNLDLSSLLDNTL-LRMTPQQISGAYTFDRMMATNVDVNRINGV---------PKEEFI 1107
            |....:|..::|..|.:|: :....||...|:....:....::|..:|.|         .:::..
  Fly  1375 LSGELLNGCNVSQWLRDTIRVDRDFQQPEIAFAKGSLDGNFLEVEELNEVNLSLVVTRFTEQQLS 1439

  Fly  1108 DTRK--DLELKGDLYLKQLNING-SLKCPFVNEAVLNDLKQRVEQVQ-QLPWRNLIVTG------ 1162
            |..:  ||.|.|.|.::. .:|| :|...:.|..::|.|::  :||. .|...|:.|||      
  Fly  1440 DPLEADDLLLDGQLVVRG-TVNGYNLPEEYANTLMINPLRE--QQVDTPLLLSNIFVTGPLEVTA 1501

  Fly  1163 --------DALWDGEE----QSQSQLDYLRQHAVRRVGN---------------------QTIAG 1194
                    |....||:    ||....|.|....:|...|                     |.|:|
  Fly  1502 PVHGLNISDVAILGEDPVLLQSPLYFDTLHAPFLRAQQNINGFDFRAWYGGSLWARGREQQEISG 1566

  Fly  1195 HVLLKEPYLKDIQSKHSLPIDLNFTQLAEDALLRRSPTNETQV---------ITAPQELQGLVRA 1250
            :..:|:     :|.|..            |.|..|..|.|...         |..|.::|.|.|.
  Fly  1567 NWRVKK-----LQVKQG------------DELRPRRQTAEESYREFCEGLVRILLPYKVQKLRRR 1614

  Fly  1251 NTLHLEQDAH-------FELVNGID------------IRRFNASLYRLS----SG---EAIA--- 1286
            ..|:.|:|..       .|...||.            |.|:|.||:..|    ||   ||:|   
  Fly  1615 FDLNQERDQENIRRVFALEAPGGISYLLINERGCWTRIHRWNGSLFDRSGAFKSGPVDEAVALRV 1679

  Fly  1287 ------ADLHFHQAPKIGKLQLEYPEVNGAPIQSIYQQGKGQSWPPVTFKNLFVEQDLNLKTVNN 1345
                  .|..|..:.::...|.| |.:|.:.::.|.     .||.....|:.....:|:..|:.|
  Fly  1680 GNTSSNQDFAFMTSYELQDDQNE-PSLNCSAVKPIL-----LSWNLNKTKSTTEHMELSADTLRN 1738

  Fly  1346 MNLDYFLQHRIPLKGDALEVFGSLTFEHLQLSGKPLLRSINGIQLDNLVFRHSNRTQSITGAKTF 1410
            :...|......||...:.:    ..|::||   :|.::|..|.|.      ..|:.:        
  Fly  1739 LKDQYEQLKNQPLPNPSYQ----QAFKYLQ---RPSIKSQLGSQW------QENKHE-------- 1782

  Fly  1411 RGGVEFTGPGHVMNLNGRELSE-SFRGSIFRNKDYNIDSLVLDKA-LFPGGLVLAGLQSQIPNRM 1473
                  ..|..:..:..|.|.. .||    ...:.||..|.:.:: ||...||            
  Fly  1783 ------LSPSEMARMRRRLLDTLEFR----LQAEVNITQLSIPESDLFDEHLV------------ 1825

  Fly  1474 RATEVQSNPLEEFQELLALGNQTSPRRLLYLDHDTESLESTWVKGPFRGSSELQVSLPL------ 1532
                      |:|.||:. ..:|..|||     |||:|...........:...|:..|.      
  Fly  1826 ----------EDFLELMR-QLRTLRRRL-----DTETLPLPNTPARVLAARSAQLIWPTLQELRE 1874

  Fly  1533 ---GYSAPCQRRTLQAKLLIHERRVLLANSSVSNQLMRLHSGDIRVKVQNHCHRPARRLRSRIRI 1594
               |..:..|.:.|:..||   ..::|||....       |||     ....|...:|||     
  Fly  1875 VSSGNDSSFQEQVLEQTLL---DVLMLANEENG-------SGD-----DEKLHAVIQRLR----- 1919

  Fly  1595 SCRNETHTLGMRQSVE--AMELLEMGEMVLLLLGTE-EEVRVLRLKRSNCSLTDWQSVLPADGRL 1656
            :.:.|..  |..:..|  |....:..|..|.|...: ..::.|||           :|.||:...
  Fly  1920 NLKGELQ--GQEEDDEGPAASYSDRNEQRLPLPEVDWRPIQTLRL-----------AVGPANRPR 1971

  Fly  1657 MKLVRMGVESRQDLILTSGMSNHRPVLAIHYRDPLNH-NFKMLQLIQGSYDLAEM-----QGNQL 1715
            :...|:.|     :..|.|.....|..|......|:| |..:.|.:.|.:....:     :...|
  Fly  1972 LLYARLTV-----VTPTDGPPPTTPSTAPAAHIQLHHANGSLFQTLAGEHGARHLTSLRVRDETL 2031

  Fly  1716 LVSCLGCRHIAI-----------FKRYSHSAEILFEPIQQLSFQERIQQLTPFKV-----GNEQY 1764
            |....||..|.:           |.|:...|:      :..|....:.||...::     ....|
  Fly  2032 LAFMEGCCRIRVLIYRGVQGFVDFVRFPAPAQ------EAKSGDGEVLQLLSLRLPLNRPPGAMY 2090

  Fly  1765 LLVVTQPEEEHFY 1777
            ||.|.|.....||
  Fly  2091 LLAVVQARRVTFY 2103

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