DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment retn and AT1G76510

DIOPT Version :9

Sequence 1:	NP_788434.1	Gene:	retn / 45976	FlyBaseID:	FBgn0004795	Length:	911	Species:	Drosophila melanogaster
Sequence 2:	NP_001185411.1	Gene:	AT1G76510 / 843984	AraportID:	AT1G76510	Length:	493	Species:	Arabidopsis thaliana

Alignment Length:	454	Identity:	78/454 - (17%)
Similarity:	147/454 - (32%)	Gaps:	168/454 - (37%)

- Green bases have known domain annotations that are detailed below.

  Fly   134 LMEQDYAAAAHAAAFGANMLPTTISS----GFPLP----HNSVAFGHVTSSPSG---------GN 181
            :.|||..:.........:.|...::|    ..|:|    |...:..|::.:|..         |.
plant     7 MQEQDVPSGTKGVVEEPSELEKDLNSIERPKSPVPEDTTHTLDSDVHLSDAPIANQIEANEEVGG 71

  Fly   182 GSSYNGGTTPTNSSNSNATTNGG------GTAGPGGTGGSGGGGGGGGGGGGGVGGHQFSFASPT 240
            .:|.:|.....:.|....|::||      |.:.|                          .....
plant    72 QNSVDGRNGDVDQSEKKITSDGGQEETTLGESNP--------------------------LKGDP 110

  Fly   241 AAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFS 305
            ::|      |....|.....|             |...:  .:.|::.|......::.|:.::.:
plant   111 SSP------HVPEESVKKWKT-------------WLLSD--AEAREVDEAGAPQDQEAFIKEVEA 154

  Fly   306 FMQKR----------GTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPS 360
            |.::.          |.|:|.|           :|:..||..||...|...|||:::.:..|.|.
plant   155 FNKENFLEFKAPKFYGQPLNCL-----------KLWRAVIKLGGYDVVTTSKLWRQVGESFHPPK 208

  Fly   361 SITSAAFTLRTQYMK------------------YLY-----PYECEKKNLSTPAEL----QAAID 398
            :.|:.::|.|..|.|                  ||:     .||   |:|....||    .|::.
plant   209 TCTTVSWTFRIFYEKVNFIFGLSTEYALILMRLYLFSLALLEYE---KHLRQNGELNLPGSASLP 270

  Fly   399 GNRREGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAH 463
            .:..|...||:                                  .|:.:...:..|||.|....
plant   271 SSGIEKEASSH----------------------------------QASGSGRTRRDAAARAMQGW 301

  Fly   464 H--RLMGAPAFGQMPN-LVKQE-----IESRMMEYLQLIQAKKEQGMPPVLGGNHPHQQQHSQQ 519
            |  ||:|:   |::.. :||::     .:.:.::.:.:.:.|...||..|.  :|..::|.:.:
plant   302 HSQRLLGS---GEVTEPIVKEKGLNSTPKQKNLKNIGVQKQKTTTGMDLVF--SHESEKQSTAE 360

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
retn	NP_788434.1	BRIGHT	294..386	CDD:128777	26/124 (21%)
AT1G76510	NP_001185411.1	BRIGHT	143..257	CDD:128777	28/127 (22%)
AT1G76510	NP_001185411.1	ACD_sHsps-like	374..454	CDD:107221
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2744
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR15348
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000