Protein Alignment retn and AT1G76110

DIOPT Version :9

• Sequence 1: NP_788434.1
• Gene: retn / 45976
• FlyBaseID: FBgn0004795
• Length: 911
• Species: Drosophila melanogaster
• Sequence 2: NP_177738.1
• Gene: AT1G76110 / 843943
• AraportID: AT1G76110
• Length: 338
• Species: Arabidopsis thaliana
• Alignment Length: 129
• Identity: 39/129 - (30%)
• Similarity: 61/129 - (47%)
• Gaps: 7/129 - (5%)

  Fly   255 SASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYE--INDDPKRKEFLDDLFSFMQKRGTPINRL 317
            |:.|.||.|:|:......:....:| :.:...|:|  :.|.   ..|.|.|..|.....|.. .:
plant     2 SSDNESTPSQATVEMMATSPAKIKE-YPEPLALHEVVVKDS---SVFWDTLRRFHSIMSTKF-MI 61

  Fly   318 PIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYE 381
            |::....|||:.||..|..|||...|:.:|.|:|:.......::.|||:|.||..|:..|:.||
plant    62 PVIGGKELDLHVLYVEVTRRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYE 125

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retn	NP_788434.1	BRIGHT	294..386	CDD:128777	29/88 (33%)
AT1G76110	NP_177738.1	BRIGHT	39..128	CDD:128777	30/91 (33%)
		HMGB-UBF_HMG-box	255..318	CDD:238686

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	58	1.000	Domainoid score	I3936
eggNOG	1	0.900	-	-		E1_KOG2744
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm2864
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.810