Sequence 1: | NP_788434.1 | Gene: | retn / 45976 | FlyBaseID: | FBgn0004795 | Length: | 911 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006514192.1 | Gene: | Arid5b / 71371 | MGIID: | 2175912 | Length: | 1214 | Species: | Mus musculus |
Alignment Length: | 880 | Identity: | 159/880 - (18%) |
---|---|---|---|
Similarity: | 265/880 - (30%) | Gaps: | 352/880 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 247 EARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKE--FLDDLFSFMQK 309
Fly 310 RGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYM 374
Fly 375 KYLYPYE----------------CEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPM-- 421
Fly 422 -----------------------------------------TPISR------------------- 426
Fly 427 ------------PS-----------LPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMG 468
Fly 469 AP----------------------------------------------AFGQMPN-LVKQEI--- 483
Fly 484 ----------ESRMMEYLQLIQAKKEQG-MPPV-------------LGGNHPHQQQHSQQQQQQ- 523
Fly 524 -----------QHHHQQQQQQQSQQQ----HHLQQ-----QRQRSQSPDLSKHEALSAQVALWHM 568
Fly 569 YHNNNSPPGSAHTSPQQREAL-NLSDSPPNLTNIKREREREPTPEPVDQDDKFVDQPPPAKRVGS 632
Fly 633 GLLPPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGEPEDDYAHGEHNTTGNSSSMH-- 695
Fly 696 DDSEPQQMNG----HHHHQTHHL---------DK---SDDSAIENSPTTST-------TTGGSVG 737
Fly 738 HRHSSPVSTKKKGGAKPQ---------------------SGGKDVPTEDKDASSSGKLNP--LET 779
Fly 780 LSLLSGMQFQVARNGTGDNGEPQLI-----VNLELNGVKYSGVLVANVPLSQSETRTSSPCHAEA 839
Fly 840 PTVEEEKDEEEEEE--------PKAAEEESHRSPV 866 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retn | NP_788434.1 | BRIGHT | 294..386 | CDD:128777 | 26/109 (24%) |
Arid5b | XP_006514192.1 | PTZ00121 | <437..>562 | CDD:173412 | 10/124 (8%) |
ARID_ARID5B | 347..441 | CDD:350649 | 26/93 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1374 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |