Protein Alignment retn and retn

DIOPT Version :10

• Sequence 1: NP_788434.1
• Gene: retn / 45976
• FlyBaseID: FBgn0004795
• Length: 911
• Species: Drosophila melanogaster
• Sequence 2: XP_061499049.1
• Gene: retn / 5667193
• VectorBaseID: AGAMI1_010029
• Length: 979
• Species: Anopheles gambiae
• Alignment Length: 1088
• Identity: 396/1088 - (36%)
• Similarity: 485/1088 - (44%)
• Gaps: 371/1088 - (34%)

  Fly    15 STSNIER--DSDLGDD--LS-----HGDRTDDEMRDCDSVD-----------------------G 47
            |....||  |||||||  ||     |.||..|..|:.:|.|                       .
Mosquito     4 SVCRTERDTDSDLGDDSPLSHTADEHSDRETDPGREGESSDEGVNVNRPSPDAKMTSGMEFGRSP 68

  Fly    48 EHHQLSAKAAIAARLSHTVSGGGGSFASPEPQTELPLSHHHQLPPNHPLNALGSFM-------GI 105
            :||...::|..||..:...:.....|.:                 ||||..|.:..       |:
Mosquito    69 DHHSELSQATAAAAAAAAAAAAAAQFGA-----------------NHPLGVLSNLTALNMNVPGL 116

  Fly   106 GGLHS-IPNLQHSDVLEKLKMQVRDMKVG-LMEQDYA---AAAHAAA--FGANMLPTTISSGFPL 163
            .||.| :....|.|||||||||||||||| ||.:..|   ||.|||:  |||.:..:|.:
Mosquito   117 SGLASGLAAGHHGDVLEKLKMQVRDMKVGALMGEQMAADFAALHAASSPFGAALAASTAN----- 176

  Fly   164 PHNSVAFGHVTSSPSGGNGSSYNGGTTPTNSSNSNATTNGGGTAGPGGTGG-----SGGGGGGGG 223
                          ..|||....|      |....|.   ||:.|.|.:||     ||||||||.
Mosquito   177 --------------GAGNGMGMFG------SGRDEAR---GGSGGSGSSGGSMNVASGGGGGGGA 218

  Fly   224 GGGGG------VGGHQFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFK 282
            .|||.      ..|..|||..|. ||..|:     .|..||||||||.|||||||||||||||||
Mosquito   219 AGGGSQSQTGPQNGSNFSFTLPN-APISKD-----GNPGSNSSTSSETSNSSQQNNGWSFEEQFK 277

  Fly   283 QVRQ----------------LYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELY 331
            ||||                ||||||||||||||||||.||||||||||||||||||||||||||
Mosquito   278 QVRQVSHQHKALNRNSVWLTLYEINDDPKRKEFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELY 342

  Fly   332 NLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAA 396
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito   343 NLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAA 407

  Fly   397 IDGNRREGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAA 461
            |||||||||||||||:::       ..:.|..:|.|:.||.||:||:|.    |||..
Mosquito   408 IDGNRREGRRSSYGQFDS-------PSVQRSPIPQGISQMPPLSLVSHV----NQQQH------- 454

  Fly   462 AHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGGNHPHQQQHSQQQQQQQHH 526
             ||||:  |..||:||::..|.|.||:.|:::.| .||.|
Mosquito   455 -HHRLL--PPVGQIPNMLPAEFEQRMLNYIKMFQ-PKEMG------------------------- 490

  Fly   527 HQQQQQQQSQQQHHLQQQRQRSQSPDLSKHEALSA----QVALWHMYH-NNNSPPGSAHTSPQ-- 584
                                ||||||  |..||:|    :||||:||: :.||||.|.:|||:
Mosquito   491 --------------------RSQSPD--KLSALNAIDISRVALWNMYNPSPNSPPNSLNTSPENN 533

  Fly   585 QREALNLSDSPPN-LTNIKREREREPTPEPVDQDDKFVDQPPPAKRVGSGLLPPGFPANFYLNPH 648
            .:.||:||:||.: :..|||||:     .|||..|        .:..|:||.||...::.:.:.|
Mosquito   534 MQSALDLSESPDHAMAAIKRERD-----HPVDFSD--------PRDYGNGLGPPAKRSHHHHHSH 585

  Fly   649 N---------------------------------------------------------------- 649
            :
Mosquito   586 HHNRSLTPQKLNSSSQDEDDARSDSTPVNLRENGSHGRRATLDDDGDDEEDEMEDETTDEDMLRA 650

  Fly   650 --MAAVAAAAGFHHP---SMGH----------------------QQDAASEGEPEDDYAHGEHNT 687
              .||.||||...||   |:..                      ||..|::.:.:......:|:.
Mosquito   651 SFAAAAAAAAVNQHPLALSLADHHLQQQQQQQQQQQQQRERERIQQQVAAQQQQQQQQREQQHSL 715

  Fly   688 TGNSSSMHD--------------DSEPQQ-----------MNGHHHHQTHHLDKSDDSAI----- 722
            .....|:.|              .|:.||           ::.||.|| ..|.....:.:
Mosquito   716 ATLDLSILDRERLRCDSADKLKRQSQQQQQQQQQQQQQQLLDQHHLHQ-RQLQHQQQARVARELR 779

  Fly   723 --ENSPTTSTTTGGS-VGHRHSSPVSTKKKGGAKPQSGGKDVPTEDKDASSSGKLNPLETLSLLS 784
              ||....|.|...| :.|...:.:||...||    ..|.|               |..:...::
Mosquito   780 KHENGDRLSLTPDSSELLHHSKNHLSTSGGGG----GAGSD---------------PFSSPLGIT 825

  Fly   785 GMQFQVARNGTGDNGEPQLIVNLELNGVKYSGVLVANVPLSQSETRTSSPCHAEAPTVEEEKDEE 849
            ||||::...|....|:.:|:|.:|.|||:|.|||.|| |||.:  ..|:|..:..|:       .
Mosquito   826 GMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFAN-PLSSA--NLSAPPASTPPS-------S 880

  Fly   850 EEEEPKAAEEESHRSPVKQE---NEDVDQDMEGSEVLLNGGASAVGGA 894
            ......|:...|..||||..   :.....|...|....|...:|:|.|
Mosquito   881 SVSATSASPIGSMVSPVKSSAAAHIASPLDERDSSASANIDVAAMGSA 928

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retn	NP_788434.1	ARID_Dri-like	277..401	CDD:350645	122/139 (88%)
retn	XP_061499049.1	None