Sequence 1: | NP_788434.1 | Gene: | retn / 45976 | FlyBaseID: | FBgn0004795 | Length: | 911 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009304080.1 | Gene: | arid3a / 562799 | ZFINID: | ZDB-GENE-140106-97 | Length: | 524 | Species: | Danio rerio |
Alignment Length: | 390 | Identity: | 156/390 - (40%) |
---|---|---|---|
Similarity: | 204/390 - (52%) | Gaps: | 98/390 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 242 APSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSF 306
Fly 307 MQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRT 371
Fly 372 QYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQ--YEAMHNQMPMTPISRP------- 427
Fly 428 --SLPG----------------GMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQ 474
Fly 475 MPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGGNHPHQQQHSQQQQQQQHHHQQQQQQQSQQQH 539
Fly 540 HLQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKRE 604
Fly 605 604 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retn | NP_788434.1 | BRIGHT | 294..386 | CDD:128777 | 76/91 (84%) |
arid3a | XP_009304080.1 | BRIGHT | 203..294 | CDD:128777 | 75/90 (83%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170592200 | |
Domainoid | 1 | 1.000 | 153 | 1.000 | Domainoid score | I4247 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001099 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_105170 | |
Panther | 1 | 1.100 | - | - | O | PTHR15348 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.930 |