Sequence 1: | NP_788434.1 | Gene: | retn / 45976 | FlyBaseID: | FBgn0004795 | Length: | 911 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102471.1 | Gene: | Arid3b / 367092 | RGDID: | 1306335 | Length: | 565 | Species: | Rattus norvegicus |
Alignment Length: | 519 | Identity: | 172/519 - (33%) |
---|---|---|---|
Similarity: | 229/519 - (44%) | Gaps: | 152/519 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 238 SPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQ------------------- 283
Fly 284 --VRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINK 346
Fly 347 KLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQ 411
Fly 412 YEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMP 476
Fly 477 NLVKQEIESRMMEYLQLIQA----------------KKEQGMP-----------PVLG---GNHP 511
Fly 512 HQQQHSQQQQQQQHHHQQQQQQQSQQQHHLQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPP 576
Fly 577 GSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVDQDDKFVDQPPPAKRVGSGLLPPGFPA 641
Fly 642 NFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGEPEDDYAHGEHNTTGNSSSMHDDSEPQQMNG 705 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
retn | NP_788434.1 | BRIGHT | 294..386 | CDD:128777 | 73/91 (80%) |
Arid3b | NP_001102471.1 | ARID_ARID3B | 196..321 | CDD:350643 | 96/124 (77%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350493 | |
Domainoid | 1 | 1.000 | 150 | 1.000 | Domainoid score | I4280 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2744 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 255 | 1.000 | Inparanoid score | I3096 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001099 | |
OrthoInspector | 1 | 1.000 | - | - | otm44987 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR15348 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
9 | 8.940 |