Protein Alignment retn and let-526

DIOPT Version :9

• Sequence 1: NP_788434.1
• Gene: retn / 45976
• FlyBaseID: FBgn0004795
• Length: 911
• Species: Drosophila melanogaster
• Sequence 2: NP_001368147.1
• Gene: let-526 / 3565337
• WormBaseID: WBGene00002717
• Length: 1768
• Species: Caenorhabditis elegans
• Alignment Length: 909
• Identity: 176/909 - (19%)
• Similarity: 274/909 - (30%)
• Gaps: 322/909 - (35%)

  Fly    15 STSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGG-------- 71
            :|||    :...::.|.||.:..:.:...............||..|.::|   ||||
 Worm    18 TTSN----AVTAENPSRGDESQQQQQQPQQQQKRGEDADKYAASVAEVAH---GGGGPKKDDQVP 75

  Fly    72 -----SFASPE--------PQTELPLSH--------HHQLPPNHPLNALGSFMGIGGLHSIPNLQ 115
                 |..:|:        |..:.|..|        ||.:|||       ||....|.|   :.|
 Worm    76 PAPDASMPTPQQQQQQPNLPPPQQPYEHPAQQHPPQHHSVPPN-------SFAPPPGQH---HPQ 130

  Fly   116 HSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGAN-MLPTTISSGFP-----------LPHNSV 168
            |.               |:...::...      ||. .:|....:|:|           .||.:.
 Worm   131 HP---------------GMPPMEWRPP------GAEYQMPPGYPAGYPPYGMPPRHHPGYPHPAY 174

  Fly   169 AF---------------------GHVTSSPSGGNGSSY-------------------NGG-TTPT 192
            .:                     |.:...|.|...:.:                   ||. .||:
 Worm   175 GYPPPGAPYGYPPQMMRPPMMAPGDMVRMPPGPTPTEWAAQQQAQAASRSVPPKEGPNGNPATPS 239

  Fly   193 NSSNSNATTNGGGTA------GPGGTGGSGGGGGGGGGGGGGVGG-------------HQFSFAS 238
            :||....:.:....|      .|.||               .:..             .|.....
 Worm   240 SSSQPIPSPSASSIAEESLDDKPSGT---------------KMPAQPPPQQHPPPPQPQQIMSPM 289

  Fly   239 PTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNG--WSFEEQFKQVRQLYEINDDPK----RK 297
            |..||..::|       ..:||.:|.|:..:.:.:|  .|..|.|:::.....:::..|    |:
 Worm   290 PPQAPPSQQA-------TPSSSAASVAAPDTPKVSGKVLSKAELFEKLVGPITLHNPMKVMAERR 347

  Fly   298 EFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSI 362
            .|.:.|..|.:..|.|:..:|.::|..:||:.||..|.|:||...|...|.|:.:....:...:.
 Worm   348 GFFERLIEFCEHNGEPLTMVPQVSKQSIDLHRLYIGVRAKGGFQQVTKDKYWKNLCTEANPDLAE 412

  Fly   363 TSAA-FTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRR---------------SSYGQ 411
            :||| :.||..|.::|...||.:.. ..|.:..|..|..:|:.:|               :..|.
 Worm   413 SSAAGYQLRKHYQRHLLMLECRETG-RNPEDEVAFADKMKRQRKREPAGGNAAAAAAVAAAQQGD 476

  Fly   412 YEAMH-------------------NQMP-MTPISRPSLPG--------------GMQQMSPLALV 442
            .::.|                   |..| ..|...|..||              ||....|
 Worm   477 QKSQHGAPGGSGAPPPGPPGAYPGNGAPGGPPGGPPQFPGHPGMDPNYHYYQQHGMMPPHP---- 537

  Fly   443 THAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLG 507
            .|...........:......|.|..|.|. |..|.  .|.:.:.|.:::|.:.
 Worm   538 GHPGYPPQHMNAFSPGQYPGHQRPPGGPG-GPPPG--PQAMRAPMPQHMQEMD------------ 587

  Fly   508 GNHPHQQQ-HSQQQQQQQHHHQQQQQQQSQQQHHLQQQRQRSQSPDLSKHEALSAQVALWHMYHN 571
               .||:| ::.||....|||.|||.....|....||....:.|...:...|.|:|.|
 Worm   588 ---EHQRQWYAHQQAAAAHHHAQQQAAAQAQAAQAQQASTPAPSTTPAPQAASSSQAA------- 642

  Fly   572 NNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVDQDDKFVDQPP-PAKRVGSGLL 635
               |...|:|.|          :.|:.:|                      ||| ||....|..|
 Worm   643 ---PTSGANTQP----------ATPSASN----------------------QPPTPASASASTTL 672

  Fly   636 PPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGE--PEDDYAHGEHNTTGNSSSMHDDS 698
                    ::.|.::|. .:.||...||.|....|..:..  |....|.....||  ||......
 Worm   673 --------HVEPASVAG-GSQAGSRAPSAGPGPSATPDSSTIPSASAAADAQTTT--SSETSTPG 726

  Fly   699 EPQQMNGHHHHQTHHLDKSDDSAIENSPTTSTTTGGSVGHRHSSPVSTKKKGGAKPQSGGKDVP 762
            ||                 ..|...::|..||:.        ..|.|.:.....:|..|....|
 Worm   727 EP-----------------TSSTPSDTPAPSTSV--------PPPTSVQPPQPQQPPQGPPGPP 765

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retn	NP_788434.1	BRIGHT	294..386	CDD:128777	29/96 (30%)
let-526	NP_001368147.1	ARID_ARID1A-like	344..438	CDD:350629	28/94 (30%)
		PHA03247	<625..916	CDD:223021	43/219 (20%)
		PRK12323	<626..>741	CDD:237057	36/184 (20%)
		BAF250_C	1264..1535	CDD:403301

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910