Protein Alignment retn and rsc9

DIOPT Version :10

• Sequence 1: NP_788434.1
• Gene: retn / 45976
• FlyBaseID: FBgn0004795
• Length: 911
• Species: Drosophila melanogaster
• Sequence 2: NP_596197.1
• Gene: rsc9 / 2539948
• PomBaseID: SPBC1703.02
• Length: 780
• Species: Schizosaccharomyces pombe
• Alignment Length: 260
• Identity: 57/260 - (21%)
• Similarity: 98/260 - (37%)
• Gaps: 56/260 - (21%)

  Fly   278 EEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVD 342
            ||.....:.|...||     .||..:.||.|:||.||:..|.:.:..:.|||||..||.||| .|
pombe    10 EEPVYSNKSLTNEND-----SFLSLIESFSQERGVPIDINPKIGRKPILLYELYKKVIKRGG-YD 68

  Fly   343 VIN--KKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKK---NLSTPAELQAAIDGNRR 402
            .::  :..|..|.:..:......||.. |:..|.|||..:|....   .|..|:.|:.:
pombe    69 AVSATEDGWTNIAEEFNQSDPARSAGI-LQNVYFKYLISWEIHDHWHLLLPPPSTLELS------ 126

  Fly   403 EGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALV----THA-----------------A 446
            |.|::...:.:..::..|..|            .:|:.::    ||:                 .
pombe   127 ENRQNVLERVKVFNSCSPPKP------------TNPITIIDNDKTHSFKKFYKSLVKEDEENGIE 179

  Fly   447 VANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGGNHP 511
            ...|:...::|:....:.....:..|..:| .....::|.:.:|:.    :.....||.||...|
pombe   180 KKINEAMNSSASQPLPNSTNFASTTFPSVP-FHPLPVDSGLQKYID----RNSNLTPPALGAGVP 239

  Fly   512  511
            pombe   240  239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retn	NP_788434.1	ARID_Dri-like	277..401	CDD:350645	39/127 (31%)
rsc9	NP_596197.1	BRIGHT	21..113	CDD:128777	33/98 (34%)