Protein Alignment retn and cfi-1

DIOPT Version :9

• Sequence 1: NP_788434.1
• Gene: retn / 45976
• FlyBaseID: FBgn0004795
• Length: 911
• Species: Drosophila melanogaster
• Sequence 2: NP_492644.2
• Gene: cfi-1 / 188793
• WormBaseID: WBGene00000476
• Length: 467
• Species: Caenorhabditis elegans
• Alignment Length: 354
• Identity: 142/354 - (40%)
• Similarity: 182/354 - (51%)
• Gaps: 95/354 - (26%)

  Fly   259 SSTSSEASNSSQQNNG--WSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMA 321
            |..|.|.|.|....:|  ||:|||||   ||||::||.||||:|||..:||.:.|.|:.|:||||
 Worm   148 SVKSEEPSESGINASGPAWSYEEQFK---QLYELSDDVKRKEWLDDWLNFMHRIGKPVTRIPIMA 209

  Fly   322 KSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKN 386
            |.||||||||.||:..||||::||||||:||.|||:||||||||||||||||.||||.|||||:.
 Worm   210 KQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKEK 274

  Fly   387 LSTPAELQAAIDGNRRE--GRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVAN 449
            ||..::||.||||||||  |||::                  ||.|...|       :.||
 Worm   275 LSNQSDLQQAIDGNRREAPGRRTA------------------PSFPLPFQ-------LPHA---- 310

  Fly   450 NQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGGNHPHQQ 514
                 |:|||...:::|.|   .|...:|:..|      ..|.| ||.      .:.|.::..:|
 Worm   311 -----ASAAATMLNNQLNG---LGMRNDLLDDE------NTLSL-QAS------GLFGTSYGAEQ 354

  Fly   515 Q-----HSQQQQQQQHHHQQQQQQQSQQQHHLQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNS 574
            .     |.:..::.|...|||..:||.                     .|:|         .:|.
 Worm   355 MAILEAHQRNLERAQRAVQQQVARQSL---------------------GLTA---------CSNG 389

  Fly   575 PPGSAHTSPQQREALNLSDSP---PNLTN 600
            ..|:.|.|.::..:.|.||.|   |.|.|
 Worm   390 NGGNIHNSGRESTSSNDSDIPAKRPKLEN 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retn	NP_788434.1	BRIGHT	294..386	CDD:128777	67/91 (74%)
cfi-1	NP_492644.2	ARID	183..269	CDD:198082	62/85 (73%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160159353
Domainoid	1	1.000	134	1.000	Domainoid score	I3106
eggNOG	1	0.900	-	-		E1_KOG2744
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	232	1.000	Inparanoid score	I2177
Isobase	1	0.950	-	0	Normalized mean entropy	S4750
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001099
OrthoInspector	1	1.000	-	-		oto18106
orthoMCL	1	0.900	-	-		OOG6_105170
Panther	1	1.100	-	-	LDO	PTHR15348
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1374
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.820