Protein Alignment retn and arid4b

DIOPT Version :10

• Sequence 1: NP_788434.1
• Gene: retn / 45976
• FlyBaseID: FBgn0004795
• Length: 911
• Species: Drosophila melanogaster
• Sequence 2: XP_005173089.2
• Gene: arid4b / 100537923
• ZFINID: ZDB-GENE-160607-1
• Length: 1240
• Species: Danio rerio
• Alignment Length: 763
• Identity: 150/763 - (19%)
• Similarity: 253/763 - (33%)
• Gaps: 224/763 - (29%)

  Fly   243 PSGKEARHFAANSA------------SNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPK 295
            |:...|..|..|.|            |:||...|.....:|....|.||:.::|....|..|:
Zfish   249 PALDAAWEFQRNGAVPNTWRTEVKDESSSSEDEEEEEEEEQEEEASSEEEEEEVEPFPEEKDN-- 311

  Fly   296 RKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPS 360
               ||..|:.||:.||||||:.|::....|:|::||.||...||..::.:..:|:::.:.|.:|.
Zfish   312 ---FLQQLYKFMEDRGTPINKRPVLGYKNLNLFKLYRLVHKLGGFDNIESGSVWKQVYQDLGIPV 373

  Fly   361 SITSAAFTLRTQYMKYLYPYE--CEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTP 423
            ..::|.:.::..|.||||.:|  |....:|...:|.      .:.|.::|.           .|.
Zfish   374 LNSAAGYNVKCAYRKYLYGFEDYCTSTGISFRMDLP------YKTGEKTSC-----------KTE 421

  Fly   424 ISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMM 488
            :....:           :.|...|:.|                        .|...|...||...
Zfish   422 VKAEEV-----------ISTENTVSLN------------------------TPEEHKSITESERS 451

  Fly   489 EYLQLIQAKKEQGMPPV-----LGGNHPHQQQHSQQQQQQQHHHQQ------QQQQQSQQQHHLQ 542
            ....|::.:|.:.:.|.     :.|.:...::|::::.:.....:|      ....:..::...:
Zfish   452 CTRHLLKEEKTETVTPCEEKADISGENKEDEKHAEEENEMNEEVKQCMSTGETDVTEDVKEEPCE 516

  Fly   543 QQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPG-----------SAHTSPQQREALNLSDS-- 594
            :...:..|.|:|..|....|.  :..|     |||           |..|.....:..||...
Zfish   517 EPDDKDLSGDVSSQEWEEGQE--FECY-----PPGMKVQVRYGRGRSLKTYDATVKESNLEGGEV 574

  Fly   595 ------------------------PPNLTNI-----------KREREREPTPEPVDQDDKFVDQP 624
                                    |.| .|:           |.||||:......|::|.
Zfish   575 LYLVHYCGWNVRYDEWIKADKIVRPAN-KNVPKIKHRKKIKNKAERERDRIERLADREDL----- 633

  Fly   625 PPAK-------RVGSG---------LLPPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASE 673
            |.:|       :|.||         .:..|       |..::...:...|.  |......|.:..
Zfish   634 PSSKNRINRLSKVNSGGDVFSKMEECVDKG-------NQQSIEITSILNGL--PGSDSSTDDSER 689

  Fly   674 GEPEDDYAHGEHNTTGNSSSMHDDSEPQQMNGHHHHQTHHLDKSDDSAIENSPT----TST---- 730
            .|.||    .:|:...:....|....||..:...:.......|:...| |..||    |.|
Zfish   690 EEDED----ADHDEDDDHPGAHKADPPQSQHWEKNSSPPEAPKTPADA-EQEPTLQDSTETPKRK 749

  Fly   731 --TTGGSVGHRHSSPVSTKK--KGGAKPQSGGKDVPT------EDKDASS--------------- 770
              .|..|.|.|..:..::|.  ||..:...||:.:.:      ||:..||
Zfish   750 ELDTNASAGRRKKAENTSKSPAKGKTRNSRGGEWLQSGSPKKLEDRGESSSEDEPKGHPKNKSSP 814

  Fly   771 SGKLNPLETLSLLSGMQFQVARN-------------GTGDNGEPQLIVNLELNGVKYSGVLVANV 822
            |.|.|.::..|...|..:::...             |....|:..:..::::...|.:  |....
Zfish   815 SKKYNGVKEKSKSRGAFWEIPEKRAKVSAGIEERSPGCRTKGQKDVWSSIQVQWPKKT--LKELF 877

  Fly   823 PLSQSETRTSSPCHAEAPTVEEEKDEEEEEEPKAAEEESHRSPVKQEN 870
            ..|.:|...|.|........|..:|||||||   .||:....|....|
Zfish   878 SDSDTEAANSPPPAGPEACSESARDEEEEEE---EEEKLQEHPSSGTN 922

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
retn	NP_788434.1	ARID_Dri-like	277..401	CDD:350645	38/125 (30%)
arid4b	XP_005173089.2	None