DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6KL and prkcha

DIOPT Version :9

Sequence 1:NP_524861.2 Gene:S6KL / 45970 FlyBaseID:FBgn0283473 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001116528.1 Gene:prkcha / 100144561 ZFINID:ZDB-GENE-080402-5 Length:712 Species:Danio rerio


Alignment Length:326 Identity:103/326 - (31%)
Similarity:152/326 - (46%) Gaps:51/326 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 RNSFRHRNKATRKSLTSLHGSRRGKTQWHRPLTNSIFNSHFKETSKNDLYRIDHLVAKGAFGVVF 174
            |||........:....|:.| .||:::..:.|...|.|           :.:..::.||:||.|.
Zfish   314 RNSVGLAGLDAQSRTLSVRG-ERGQSKKEQCLKLGISN-----------FTLLQVLGKGSFGKVM 366

  Fly   175 KVS-SKSDISQCYALKVLKKSKLIEDNSVRQIKDEADIQKVCGHHPFIVKQIDLWQNRHNLHILS 238
            .|. :.||  |.:|:|:|||..:::|:.|.....|..:..:...||::.:....:|....|..:.
Zfish   367 LVRLNGSD--QVFAVKILKKDIILQDDDVECTMTEKRVLSLASTHPYLTQLYCCFQTPERLFFVM 429

  Fly   239 EYVPNGEL---FSKITHFSIDLVRLYIGEIALALDFLHNAGIIYRDAKPENILLTEQFHIKLTDF 300
            |:|..|:|   ..|...|..:..|.|..||..||.|||:.||:|||.|.:|:||.:..|.||.||
Zfish   430 EFVNGGDLMFHIQKSRKFEENRARFYTAEITSALIFLHSKGIVYRDLKLDNVLLDKDGHCKLADF 494

  Fly   301 GLSK-WLKLGANTRTMCGTFKYMAPEILCGEPYGHAVDWWALGVIACQMLTQKSPNIKRHLLRRR 364
            |:.| .:..|..|.|.|||..|:|||||....||.:||||||||:..:||:..:|          
Zfish   495 GMCKEGMFDGIVTGTFCGTPDYIAPEILQELLYGPSVDWWALGVLLYEMLSGHAP---------- 549

  Fly   365 ESVEPEDGLSNAPSIAQINGCLQDSDGDSEDFLPEEVQH---LTHEGRDVLRKLLTIEPRQRIRS 426
            ...|.||.|                   .|..|.||:.:   |:....|:|:..||..|.:|:..
Zfish   550 FEAENEDDL-------------------FESILTEEIIYASWLSTNAVDILKGFLTKNPSRRLGC 595

  Fly   427 V 427
            |
Zfish   596 V 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6KLNP_524861.2 S_TKc 159..431 CDD:214567 93/277 (34%)
STKc_AGC 167..>354 CDD:270693 76/191 (40%)
prkchaNP_001116528.1 C2_PKC_epsilon 3..136 CDD:175981
C1_1 169..220 CDD:278556
C1_1 241..293 CDD:278556
S_TKc 351..611 CDD:214567 93/277 (34%)
PKc_like 355..678 CDD:304357 93/273 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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