DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gwl and aPKC

DIOPT Version :10

Sequence 1:NP_524860.2 Gene:gwl / 45969 FlyBaseID:FBgn0260399 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster


Alignment Length:157 Identity:57/157 - (36%)
Similarity:97/157 - (61%) Gaps:2/157 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TIKDFVIIKPISRGAFGKVFLGYKNNDSKRLFAIKVMRKSEMINKNMVSQVITERNAL-ALSRSQ 116
            ::.||.:|:.|.||::.||.: .:...::|::|:||::|:.:.:...:..|.||::.. ..|...
  Fly   612 SLNDFELIRVIGRGSYAKVLM-VELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHP 675

  Fly   117 FCVSLFYSLQSLSYVYLVMEYMVGGDLKSLLAMFGYFDEPTARFYVAEMVMALQYLHQHGIVHRD 181
            |.|.|....|:.|.::.|:|::.||||...:.......|..||||.||:.:||.:||:.||::||
  Fly   676 FLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRD 740

  Fly   182 IKPDNMLLSSSGHVKLTDFGLSKIDMR 208
            :|.||:||...||:||||:|:.|..:|
  Fly   741 LKLDNVLLDHEGHIKLTDYGMCKEGIR 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gwlNP_524860.2 Protein Kinases, catalytic domain 52..>255 CDD:473864 57/157 (36%)
Protein Kinases, catalytic domain <655..835 CDD:473864
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 54/149 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.