DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pep and ciz1

DIOPT Version :9

Sequence 1:NP_524858.1 Gene:Pep / 45961 FlyBaseID:FBgn0004401 Length:716 Species:Drosophila melanogaster
Sequence 2:XP_031747306.1 Gene:ciz1 / 100379813 XenbaseID:XB-GENE-1015495 Length:654 Species:Xenopus tropicalis


Alignment Length:531 Identity:107/531 - (20%)
Similarity:195/531 - (36%) Gaps:124/531 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 GMGNRNQRGGPMVSRGGGAGNRLNNRRGQGGGFQNRGATGSGPKPPPKQGGGGIRKQNAFDRAKK 178
            |.|..:...|.:.....|.|.|                  |....||:...||        ||.|
 Frog   202 GAGECHFHAGEISEEREGVGER------------------SVESQPPEGMSGG--------RALK 240

  Fly   179 LLAKNANQNKKKEPT---PGEKKIESPTKESPYASVPNDMFYCHLCKKHMWDANSFENHIKGRTH 240
            :..:..::::....|   |..  :|.....|. :......|.|::||.:.....:|::|:....|
 Frog   241 VTIQQRSESRTISTTDLVPAH--VERGFTSSG-SGQTGPRFCCYICKSNFQSLQAFQSHLVTARH 302

  Fly   241 LMMREGIEESYRLKANMIRQEAKIAEQLKSIEFDRLKRMGKSKQRQLDYCTMCDLNFHGHISTHR 305
            ....:.|:  :...|.::    .:....|..:.....|.||.:||   :|.:|.::|...:.||.
 Frog   303 HQRFQAIQ--HLSNACLV----TLMPTAKDPQSSTAGRDGKQQQR---WCNVCQVHFSSDLITHL 358

  Fly   306 KSEGHLQLKKFLHPKCIECNKEFATRIDYDTHLLSAEHLKKAAENNTKVGERKRQTLPISTEEEE 370
            :::.|...|:.|.|.|..|::.|.|...:..|:.|.||.:|:.|                     
 Frog   359 RTQEHKLAKRSLRPFCTVCSRHFKTPRKFVEHMKSPEHKQKSQE--------------------- 402

  Fly   371 TRDLRLPQKRKKKPVKKEGEAADGEAKKEGAGDGEGAEGDEAEGEEAKEGEEAADETKEGDELNE 435
               ||:.:|....|         .|:::....|..|...||.|           ||.:|.:.::|
 Frog   403 ---LRMQEKESWSP---------EESEELITVDAVGCFEDEEE-----------DEEEEDEGISE 444

  Fly   436 SQEEEEVALPVDPEDCILDFNDGDEIPSEVDTRLPKYNWQRAVGPGLISKLECYECSVCSKFFDT 500
            .:....|..|:         .|.:.:..:|:    :|:.::..|...:..:..|.|.:|.||:.:
 Frog   445 DETAGNVQCPL---------ADLEPVKEDVE----EYSSEKEYGLDFMVPVTGYLCRLCHKFYPS 496

  Fly   501 EVTAEIHSRTATHHRNFLKFIN-EKSSDTKIAQKRAAAALEENERKKRKVEEAEAPAAEGAAEET 564
            :..:.:     ||.::.:.|.| ::.|.||.|                 |..|||..:..:..|:
 Frog   497 DSASRL-----THCKSLMHFQNVQRYSSTKDA-----------------VNTAEASTSCSSKPES 539

  Fly   565 TEGAEGELYDPSEATGDDEDVEMVDDNAEGE---GEGEGDEEAEAEVEEDGAGQDNGEEEMEAQE 626
            .||.|.......|.|...|.:..:.::.:.|   ||...:.:.:..:..:|:|...|........
 Frog   540 LEGVEAGTSFCLENTEFAEQMATIPESLQAENSQGESYLENKQKVLLVAEGSGATTGMSGSAVGT 604

  Fly   627 EEGQEGEQEPE 637
            :||.....|||
 Frog   605 KEGSRALLEPE 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PepNP_524858.1 zf-C2H2_jaz 216..240 CDD:288983 6/23 (26%)
C2H2 Zn finger 290..310 CDD:275371 5/19 (26%)
C2H2 Zn finger 321..343 CDD:275371 6/21 (29%)
ciz1XP_031747306.1 C2H2 Zn finger 343..363 CDD:275371 5/19 (26%)
zf-C2H2_jaz 373..397 CDD:403410 7/23 (30%)
C2H2 Zn finger 374..396 CDD:275371 6/21 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005683
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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