DRSC/TRiP Functional Genomics Resources

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Protein Alignment mts and Ppp5c

DIOPT Version :9

Sequence 1:NP_001285724.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:XP_006228527.2 Gene:Ppp5c / 65179 RGDID:68415 Length:594 Species:Rattus norvegicus


Alignment Length:252 Identity:108/252 - (42%)
Similarity:158/252 - (62%) Gaps:7/252 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VTVCGDVHGQFHDLMELFRIGGKSPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYRERITILR 115
            :|||||.||||:||:.:|.:.|...:|| |:|.||:||||.:|||.:..|...|:.|.:...:||
  Rat   332 ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLR 396

  Fly   116 GNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGL-SPSIDSLDH 179
            ||||:..:.|:|||..|...|| .|.:::.|:::|::|||...::|::..:|||| |....:||.
  Rat   397 GNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDD 460

  Fly   180 IRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNNTNGLTLVSRAHQLV 244
            ||.::|.::.|..|||||||||||..:.|..:|.||....||.|:::.|...|.|..:.|:|::.
  Rat   461 IRKIERNRQPPDSGPMCDLLWSDPQPQNGRSVSKRGVSCQFGPDVTKAFLEENQLDYIIRSHEVK 525

  Fly   245 MEGYNWCHDRNVVTIFSAPNYCYRCGNQAALMELDDS-LKFSFLQFDPAPRRGEPHV 300
            .|||...|....||:|||||||.:.||:|:.:.|..| |:..|.||...|   .|:|
  Rat   526 AEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVP---HPNV 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_001285724.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 105/243 (43%)
Ppp5cXP_006228527.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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