DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and PpD3

DIOPT Version :9

Sequence 1:NP_001285724.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster


Alignment Length:302 Identity:116/302 - (38%)
Similarity:173/302 - (57%) Gaps:11/302 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MED-KATTKDLDQWIEQLNECNQL-TETQVRTLCDKAKEILSKESNVQEVKCP----VTVCGDVH 59
            :|| |.|.|.:.:.:|......:| .:...:.||: ....:..:.::.::..|    .|:|||:|
  Fly   203 LEDGKVTLKFMKELMEHYKAQKRLHRKFAYKILCE-IDTYMRAQPSLVDITVPDEEKFTICGDIH 266

  Fly    60 GQFHDLMELFRIGGKSPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQI 123
            |||:|||.:|.|.|...:.| |||.||:||||.:|||.:..|...|:.|.....:.||||||..:
  Fly   267 GQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINM 331

  Fly   124 TQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSID-SLDHIRALDRLQ 187
            .|:|||..|...||.:| :...||.:|::|||...::.:|..:||||..:.| :|||||.::|..
  Fly   332 NQMYGFTGEVTAKYTSA-MADIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNC 395

  Fly   188 EVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCH 252
            :.|.||.||:||||||....|.|.|.||.|..||.|::|.|...|.|..:.|:|::...||...|
  Fly   396 QPPEEGLMCELLWSDPQQWMGLGQSKRGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAH 460

  Fly   253 DRNVVTIFSAPNYCYRCGNQAALMEL-DDSLKFSFLQFDPAP 293
            :...:|:|||||||...||..|.:.: .::||.::..|:..|
  Fly   461 NGKCITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSFEAVP 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_001285724.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 110/291 (38%)
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 116/302 (38%)
PP2Ac 226..502 CDD:197547 109/277 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438805
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.