DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and ppp5c

DIOPT Version :10

Sequence 1:NP_476805.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_001007891.1 Gene:ppp5c / 493275 XenbaseID:XB-GENE-982044 Length:493 Species:Xenopus tropicalis


Alignment Length:317 Identity:127/317 - (40%)
Similarity:186/317 - (58%) Gaps:21/317 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDKAT---TKDLDQWIEQLNECNQLTETQ-------VRTLCDKAKEILSKESNVQEVKC----P 51
            :||:.|   .||.:..|:.:.|..|..:.|       |..:..:.|:||||..::.|:..    .
 Frog   166 IEDEYTGPQLKDGNVTIDFMLELMQFYKDQKKLHRKCVYQMLVQVKDILSKLPSLVEISLEKSQQ 230

  Fly    52 VTVCGDVHGQFHDLMELFRIGGKSPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYRERITILR 115
            ||||||.||||:|||.:|.:.|...:.| |:|.||:||||.:|||.:..|...|:.|..:..:||
 Frog   231 VTVCGDTHGQFYDLMNIFHLNGLPSENNPYIFNGDFVDRGSFSVEVIVTLFGFKLLYPAQFHLLR 295

  Fly   116 GNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGL-SPSIDSLDH 179
            ||||:..:.|:|||..|...|| :|.:::.|:::|.:|||...|:.::..:|||| |....:||.
 Frog   296 GNHETDTMNQMYGFEGEVKAKY-SAQMFQLFSEVFQWLPLAMCVNQRVLIMHGGLFSEDGVTLDQ 359

  Fly   180 IRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNNTNGLTLVSRAHQLV 244
            ||:::|.::.|..|||||||||||..:.|...|.||....||.|::..|...|||..:.|:|::.
 Frog   360 IRSIERNRQPPDSGPMCDLLWSDPQPQDGRSSSKRGVSCQFGPDVTRRFLEENGLDYIIRSHEVK 424

  Fly   245 MEGYNWCHDRNVVTIFSAPNYCYRCGNQAALMELDDS-LKFSFLQFDPAPRRGEPHV 300
            .|||...|:...||:|||||||.:.||:.|.:.|:.| ||..|.||:..|   .|:|
 Frog   425 PEGYEVSHNGLCVTVFSAPNYCDQMGNKGAYIHLNGSDLKPKFHQFEAVP---HPNV 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_476805.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 120/297 (40%)
ppp5cNP_001007891.1 NlpI <14..>123 CDD:443815
TPR repeat 22..50 CDD:276809
TPR repeat 55..85 CDD:276809
TPR repeat 90..118 CDD:276809
MPP_PP5_C 170..485 CDD:277362 125/313 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.