DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and Ppp3cb

DIOPT Version :9

Sequence 1:NP_001285724.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:XP_006518770.1 Gene:Ppp3cb / 19056 MGIID:107163 Length:534 Species:Mus musculus


Alignment Length:277 Identity:118/277 - (42%)
Similarity:165/277 - (59%) Gaps:16/277 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE 95
            :.::...||.:|..:.||:.|:|||||:||||.|||:||.:||...:|.|||:||||||||:|:|
Mouse    73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE 137

  Fly    96 TVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVD 160
            .|..|..||:.|...:.:||||||.|.:|:.:.|..||..|| :..|::...:.||.|||.||::
Mouse   138 CVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYEACMEAFDSLPLAALLN 201

  Fly   161 GQIFCLHGGLSPSIDSLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISP--------RGAG 217
            .|..|:||||||.|.:||.||.|||.:|.|..|||||||||||.:..|...|.        ||..
Mouse   202 QQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCS 266

  Fly   218 YTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCHDR------NVVTIFSAPNYCYRCGNQAALM 276
            |.:.......|...|.|..:.|||:....||......      :::||||||||.....|:||::
Mouse   267 YFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL 331

  Fly   277 ELDDSLKFSFLQFDPAP 293
            :.:::: .:..||:.:|
Mouse   332 KYENNV-MNIRQFNCSP 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_001285724.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 117/275 (43%)
Ppp3cbXP_006518770.1 MPP_PP2B 50..354 CDD:277361 118/277 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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