DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and F20D6.6

DIOPT Version :9

Sequence 1:NP_001285724.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_505103.2 Gene:F20D6.6 / 184725 WormBaseID:WBGene00017636 Length:316 Species:Caenorhabditis elegans


Alignment Length:260 Identity:57/260 - (21%)
Similarity:128/260 - (49%) Gaps:8/260 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE 95
            |.:.|.||:...|.|:.:..||.:|||:..::.|::::|:..|...:..|:|:|:.:|.|.:|:|
 Worm    40 LLEDALEIMDGTSRVEYITPPVNICGDIRSRYGDVLDIFKTCGWPFEQKYVFLGNLIDGGKFSLE 104

  Fly    96 TVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWK----YFTDLFDYLPLT 156
            |:.:|:..|:.|.:...||||.:|...:.....|..|...::.::|.|:    ....|...||:.
 Worm   105 TLVILLCCKICYPQNFVILRGFYEHELVKSDRSFIGELRVRFPDSNKWQALNAIIKSLLKRLPVM 169

  Fly   157 ALVDGQIFCLHGGLSPSIDSLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFG 221
            .:::.::.|::|.::.:|.:..::.::.......:.....::.:.|.|...  .::|...... .
 Worm   170 TVLNRKLLCVNGMVTSNIKNEKNVVSVKNGNMFENHNTRVEVQFLDIDIPS--PVTPNKIDEE-S 231

  Fly   222 QDISETFNNTNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAALMELDDSLKFSF 286
            :.|.|...:.: ::::..::.:|.|||.:.....::||.|.........|:..:|.:|...|.:|
 Worm   232 KIIKELLKSMD-MSMMINSNNVVREGYRFTLKNQLITITSGTKLQKNYNNRGVVMMMDRHNKVNF 295

  Fly   287  286
             Worm   296  295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_001285724.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 57/260 (22%)
F20D6.6NP_505103.2 MPP_superfamily 39..285 CDD:387346 53/248 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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