DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and pph-5

DIOPT Version :9

Sequence 1:NP_001285724.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_001367002.1 Gene:pph-5 / 180263 WormBaseID:WBGene00012665 Length:496 Species:Caenorhabditis elegans


Alignment Length:300 Identity:116/300 - (38%)
Similarity:165/300 - (55%) Gaps:8/300 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDKATTKDLDQWIEQLNECNQLTETQVRTLCDKAKEILSKESNVQEVKCPV----TVCGDVHGQ 61
            :|||.|.:.:.|.|:......:|.:.....:..:....:.....:.|:..|.    |:|||||||
 Worm   181 LEDKITKEFVLQLIKTFKNQQKLHKKYAFKMLLEFYNYVKSLPTMVEITVPTGKKFTICGDVHGQ 245

  Fly    62 FHDLMELFRIGGKSPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQ 125
            |:||..:|.|.|...:|| |||.||:||||.:||||:..::..|:.|.....:.||||||..:.:
 Worm   246 FYDLCNIFEINGYPSETNPYLFNGDFVDRGSFSVETIFTMIGFKLLYPNHFFMSRGNHESDVMNK 310

  Fly   126 VYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSID-SLDHIRALDRLQEV 189
            :|||..|...|| ...:...||:.|.:|||..|::.:||..||||..... :|:.||..||.::.
 Worm   311 MYGFEGEVKAKY-TQQMCDMFTETFCWLPLCHLINEKIFVCHGGLFKEDGVTLEDIRKTDRNRQP 374

  Fly   190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCHDR 254
            |.||.|||||||||....|...|.||.|..||.|::..:..|||:..|.|:|::..|||...|:.
 Worm   375 PDEGIMCDLLWSDPQPINGRSPSKRGVGCQFGPDVTSKWCETNGIEYVVRSHEVKPEGYEMHHNG 439

  Fly   255 NVVTIFSAPNYCYRCGNQAALMEL-DDSLKFSFLQFDPAP 293
            ...|:|||||||.:..|:.|.:.: .|:|...|..||..|
 Worm   440 QCFTVFSAPNYCDQMNNKGAFITITGDNLTPRFTPFDAVP 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_001285724.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 111/290 (38%)
pph-5NP_001367002.1 PLN03088 29..>139 CDD:215568
TPR repeat 33..57 CDD:276809
TPR repeat 62..91 CDD:276809
TPR repeat 96..124 CDD:276809
MPP_PP5_C 176..490 CDD:277362 115/299 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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